Coffea arabica (coffee): 113739996
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Entry
113739996 CDS
T11342
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113739996
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
113739996
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113739996
04121 Ubiquitin system [BR:
carb04121
]
113739996
Enzymes [BR:
carb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113739996
Peptidases and inhibitors [BR:
carb01002
]
Metallo peptidases
Family M67
113739996
Membrane trafficking [BR:
carb04131
]
Endosome - Lysosome transport
Others
Others
113739996
Ubiquitin system [BR:
carb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
113739996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
113739996
NCBI-ProteinID:
XP_027123253
UniProt:
A0A6P6X654
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All DBs
Position
4c
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AA seq
522 aa
AA seq
DB search
MLTRSSSSSSTAAVRINIASSARKLDVNNRIALGFYYRIADNVLKQANIFREEDNIIDLY
IMLLRYSSLVSETIPCHRDYRAALQSDKIYLKKKLMNALAELEKLKPVVQRKLEDINQQQ
RGYQPQLNLSLVNHPGKQQNLNSYAMTKTSPYVARQCNHQAPSTQQWSLTKPVDEQFRQI
RLSIPRPKEETLSRHSVFGPNGLNGQWQPPPSDTGVRYPSNIDFSPVEIPRTFADISRES
NGQKPVHDGTSIKKHDNNLESEVSKLKPLDLESKDDKKDQVEEPDSLISFETMESPVQTK
IIRQPSPPPVLAEIQDLIPSTSPAVVDRDCGLTSNADGVICAEAPLELHISTALMDSFMR
LAKSNTDKNLETCGVLAGSLKNRRFSVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLF
PLGWIHTHPTQSCFMSSIDVHTQYSYQIMLPEAIAIVMAPKDGLRTHGIFRLTTPGGMNV
IRQCPRRGFHAHDPPSDGSPIYKQCTDVYMNPKQKFDVIDLR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttgactcggtcgtcgtcatcgtcgtcgacggcggcggtgaggatcaacatcgcctcc
agtgctcggaaactcgacgtcaacaatcgaatcgctctgggattctattatcgcatcgcc
gataatgtcctcaagcaggctaacatctttcgggaagaggataatataattgatttgtac
attatgctcctaaggtattcaagtttggtctctgagacaataccatgtcatcgtgattat
agagcagctctgcaaagtgacaagatttatttgaagaagaaactaatgaatgccttggct
gagcttgagaaacttaagccagttgttcaaaggaagcttgaagacattaaccaacaacag
aggggttatcagcctcaattgaatttgtcacttgttaaccatcctggcaaacagcaaaat
ttgaatagttatgccatgactaagacttcaccatacgttgctcgacaatgcaatcatcaa
gctccaagtactcagcaatggtctcttactaagccagtagatgaacagtttcgccaaata
agattaagtattccccgtccaaaggaggaaactctttccagacattccgttttcggcccg
aatgggcttaatgggcaatggcaacctccacctagtgatacaggggtgcgctatccaagt
aatatagacttttcacctgttgagatcccaaggacatttgctgatatttcacgagaaagc
aatggccagaagcctgtgcatgatggtacctcaataaaaaagcatgataacaacttagaa
tctgaagtatcaaaattgaaaccattggacctggaaagcaaagatgacaaaaaagatcag
gttgaagaacctgattccttgatttcctttgaaacaatggaaagtcctgtgcaaacgaaa
atcatcagacagccttctcctcctcctgttcttgctgagatacaagatttgatcccatct
acttcacctgcagttgtggacagggattgcggactgacttctaatgctgatggtgtcatc
tgtgctgaagctcctctggaactgcacatttcaactgcattgatggacagttttatgagg
ctggctaagtcaaatacggacaagaatttggagacttgtggtgttcttgctggttcactt
aaaaaccgaagatttagtgttactgctcttatcatcccgaagcaagaatcaacatcagat
tcgtgtcaaacaacaaatgaggaagaaatatttgaagtgcaggataagcaatctcttttc
cctttagggtggattcatacgcatcccacacaatcgtgttttatgtcatcgatagatgtt
cacactcaatactcttatcagatcatgttgcccgaagctattgcaattgtgatggcgccg
aaagatggcttgagaacccatggcatattccggttaacaactccaggtggcatgaatgtc
ataaggcaatgccctagacgtggttttcatgctcatgaccctccgtctgatggtagccca
atttacaagcaatgtacagacgtttatatgaatcctaagcagaagttcgacgtaatcgat
ctgcgatga
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