Coffea arabica (coffee): 113740196
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Entry
113740196 CDS
T11342
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00531
Glycosaminoglycan degradation
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
113740196
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
carb00536
]
113740196
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
113740196
Glycosaminoglycan binding proteins [BR:
carb00536
]
Heparan sulfate / Heparin
Enzymes
113740196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
113740196
NCBI-ProteinID:
XP_027123527
UniProt:
A0A6P6XC30
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All DBs
Position
4c:complement(44554546..44560078)
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AA seq
535 aa
AA seq
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MGWRTSGVIFLVFLPSILAQNIGSAVLLIDSTAKFAETDTNYICATIDWWPKEKCNYNQC
PWGSSSLLNLDLSHPFLSNAIQAFKNLRLRLGGSLQDQVHYDVGNISCTPFVKQKDGLFG
FSKGCLHMKRWDELNSFFKKTGALVTFGVNALYGRHKNRRGVWQGEWDSSNAHDFIKYTI
SKGYHIDSWEFGNELSGKGVGASVDAEQYGKDVANLNSIIIEEYKSFHPRPFVLAPGGFF
DKDWYSRLLLVSGPQVVDVLTHHIYNLGAGVDHNLINKILNPHYLSKIEATFGNLSRIIQ
TDGPWASAWVGEAGGAFNNGGRHVSDTFVNSFWYLDQLGLAAKFDTKVYCRQTLIGGNYA
LLDTTTYVPNPDYYSALLWHQLMGSGVLSIDSNEPYLRSYAHCSKQKKGVTLLLINLSNE
TAFSVDVESVTHTDLPVEEKSKKKSFLHNLKKTVSWVGSKAADEDLFREEYHLTPKDGDI
QSKTMLLNGKPLKLTDGGGIPTLAPEFVDLNSPVFIDPLSIKFIVLPNFGAPGCR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggttggaggacatctggtgtaatctttctggtatttctcccctcaattttggcccaa
aatataggaagtgcagtcctgctcattgattcaacagcaaaatttgctgagacagatact
aattacatatgtgccaccattgattggtggcctaaagagaaatgcaactataaccagtgc
ccatggggatcttcatctcttctaaatctggacttgtctcatccttttctctccaacgcc
attcaagctttcaagaatttaaggttgagacttggaggttctttgcaagaccaagttcat
tatgatgttggaaacatttcttgcacaccatttgtcaaacagaaggatggattgtttgga
ttttcaaagggttgcttacatatgaaaaggtgggatgagttgaatagctttttcaaaaag
acaggagcacttgtgacctttggcgtcaatgcactctatgggaggcacaagaatagaagg
ggtgtttggcaaggggaatgggattctagcaatgcccatgattttattaaatacacaatc
tctaagggttaccatatagattcatgggaatttggtaatgagttgagtgggaagggagtt
ggcgccagtgttgatgctgaacagtatgggaaagatgttgctaatctgaattctatcatc
attgaagagtacaagagtttccatcctagaccttttgtcttagcaccagggggtttcttt
gataaggactggtattctaggctccttctagtttcaggtcctcaagttgttgatgtcctg
acccatcacatctataacctgggtgcaggagttgaccacaatcttattaataaaatcctg
aacccacactacttgagtaagatagaggccacttttggcaatcttagcagaatcatccag
accgatggtccttgggcttctgcttgggttggtgaagctgggggagcttttaacaatggt
ggtcgtcatgtttctgatactttcgttaacagcttctggtatttggatcagctcggtttg
gctgctaagtttgacactaaagtgtattgtaggcaaaccttaattggtggaaactatgct
ctcctcgacacaactacatatgttccaaatccagattattacagtgcattgctctggcat
cagcttatgggaagtggagttctttctattgacagcaatgaaccatacttgcgctcttat
gctcactgttcaaaacaaaaaaaaggagtaactttactcctgatcaatttaagcaatgaa
actgcattcagtgtcgatgttgaatctgtcacacatacagacttgcctgtagaagaaaaa
agcaagaaaaagtcttttctgcataatcttaagaagactgtttcctgggttggaagtaaa
gcagcagatgaagatctgttccgagaagaataccacttaactcccaaagatggagatatt
caaagcaaaaccatgctgctaaatggaaaaccattaaaacttactgatggaggaggcatt
ccaactcttgctccagaatttgtggatctaaattctcctgtattcattgaccctttgtcc
atcaagttcatcgtattgcccaattttggtgctccaggctgtaggtga
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