KEGG   Coffea arabica (coffee): 113740206
Entry
113740206         CDS       T11342                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113740206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113740206
Spliceosome [BR:carb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113740206
 Complex B
    113740206
 Complex C
   U2 SnRNP specific factors
    113740206
SSDB
Motif
Pfam: PRP21_like_P ubiquitin MBDa
Other DBs
NCBI-GeneID: 113740206
NCBI-ProteinID: XP_071902350
UniProt: A0ABM4U4Z1
LinkDB
Position
4c:45295814..45300445
AA seq 579 aa
MFMFFTSLADAYSKVLMPPKALTDKLRKSVTDMTTVLERCLHRLEWERSQEQARQKAEDE
IEQERLHMAMIDWHDFVVVETIDFADDEDEDLPPPMTLEEVIRRSKMTGMEEEEIIEPGK
EVEMEMDEEEVQLVEEGMRAASLEENGDLKNNEAKVTIDEAEPPMRIVKNWKRPEERLPA
ERDPTKFVVSPITGELIPDNEMSEHIRISLIDPKYKEQKERMFAKIRDTTLAPDDEITKN
IVGLARTRPDIFGTTEEEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTASQAMSQNAG
GEDLNEAGNSDMRNLPGPAAPPPPRPGMPSIRPLPPPPGLALNIPRPPNTVQYSTPTGPG
VLAPPPPRPPVVGVLPRPAPHPMSMMPGQQPLMVNRPQMHPSMSMNSPNMPVPPPPGSQF
THLSAPRPFVPLSMSQPGLPMVPPPSMPQGMPPPPPEEAPPPLPDEPEPKRQKLDDALLV
PEDQFLAQHSGPARINVSVPNHDEGNMKGQVLEILVQSLSETVSSLKEKIAGEIQLPANK
QKLSGRPGFLKDNLSLAYYNVAPGETLQLSLRERGGRKR
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtttatgttttttacatctcttgcggatgcttattcgaaagtattgatgcctccaaaa
gcgttaacagataagttgagaaagagtgtaactgacatgactacggtgcttgaaagatgc
cttcatcgcttggagtgggaacggtcgcaggagcaggctaggcagaaagctgaagatgag
atagaacaggagcgattacatatggccatgattgattggcatgactttgttgtagtagag
accatagactttgcagatgatgaggatgaagatttgccccctcctatgaccctggaggag
gttatacgaagaagcaagatgacaggtatggaagaagaggagatcattgagcctgggaag
gaagtagaaatggaaatggatgaagaggaggtgcagcttgttgaggagggcatgagggca
gctagtcttgaagagaacggggacctgaagaataatgaagctaaggttacaatagatgaa
gcagaaccacctatgaggatagtaaagaattggaagagacctgaggagaggttacctgct
gaaagagatccaactaaatttgttgtgtctccaataactggtgagctgattcctgacaat
gagatgtctgaacatatcaggatctctttaattgatccaaagtacaaggagcagaaggag
aggatgtttgcaaaaattagggatacaactcttgctcctgatgatgagatcacaaaaaat
attgttggacttgctcgaacccgtcctgatatttttggtaccactgaggaggaagtctct
aatgctgttaaggcagagatcgagaagaaaaaagatgatcaaccaaagcaagtcatttgg
gatgggcatacaggaagtattggtcgtacagcaagtcaggccatgtctcagaatgctggt
ggagaagatctaaatgaagcaggcaacagtgatatgagaaatcttccaggtcctgcagct
cctcctcctcccagacctggcatgccatcaattagacctcttcctccacctcctggactt
gccttgaatatccctaggcctcctaatactgttcagtattcaaccccaactggtcccggt
gttttggctccacctccacctaggcctccagtcgtcggtgttctgcctagacctgcacct
catccgatgtcaatgatgccgggccagcaacctctgatggtaaatcgaccccaaatgcat
ccgtccatgtccatgaattcccccaacatgcctgtgccaccgccacctggatctcaattt
acacatttgtctgctccccggccttttgttcccctttccatgtctcagcctggcctgcct
atggtcccaccgccatccatgcctcagggaatgccaccacctccacctgaggaagctcct
ccaccacttcctgatgaaccagaaccaaaaagacagaaacttgatgatgctctgcttgtt
cccgaggatcaatttttagctcaacattcgggacctgctcgtatcaacgtgtctgtgccc
aatcatgatgaaggcaatatgaaagggcaggtgctggagattcttgtgcagtcgctgtct
gaaactgtcagcagcttgaaagagaaaatagctggtgagattcaacttccggctaacaaa
cagaaactgagtggaaggcctggttttctcaaggacaatttgtcgctcgcatattataac
gttgcacccggagaaacacttcaactctctctcagagagcgtggaggaagaaagagatga

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