Coffea arabica (coffee): 113740246
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Entry
113740246 CDS
T11342
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
carb Coffea arabica (coffee)
Pathway
carb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
113740246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
carb04040
]
113740246
Ion channels [BR:
carb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113740246
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
zf-RRPl_C4
DpnI
Motif
Other DBs
NCBI-GeneID:
113740246
NCBI-ProteinID:
XP_027123596
UniProt:
A0A6P6X9L5
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Position
4c:complement(7969980..7990682)
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AA seq
781 aa
AA seq
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MAASERDVTHLLSATDSQVDEQDGSQFCRLTYRSASLSIPMDSTEFNDSENSLVGRSVYL
ENERKSSYLQMSGPLYISSGDGIVLGPMQSAVAQQPTEAPVVRYPPLNGRERKVWPDKSY
ASKNDHLIKSGQLGMCDDPYCTTCPSYYHLKGQQKKSKSSDMLDYKFHNMIYGDAKGWAK
KVSSFLGPFIPPIMNPHAKVVQQWNQFFFVSCLFAVFLDPLFFFLLYVNQDNKCILLNWP
MTTTIVALRSMTDFLYLIHVLLQFRLAYVAPESRVVGAGDLVDHPKKIALHYLSGYFLID
LFVVLPLPQIIILAVLPNSIGSSGANYAKNLLRAAILAQYIPRLYRVLPLLAGQSSTGFI
FESAWANFVINLLMFMLSSHVVGSCWYLFGLQRVNQCLRDACHDSGIARCMDFIDCGHGN
DRSWFASDPTWDLWKNNANATACFGGGNFSFGIYAQSVDLTTTENVITRYIYSLFWGFQQ
ISTLAGNQVPSYFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQSLGRRKLEMSLRRRDVE
QWMSHRRLPEELRRKVLEAERFSWASTRGVNEETLLENLPEDLQIDIRRHLCNFVKKVRI
FTLVEEPILDAICERLKQKIYIKGSKVLHRGGLVDKMVFIVRGKIENIGEDGYQVPLSEG
DVIGEELLTWCLEQSSVSKDGKKLRFPGPNMISNREVRCLTNVEAFVLRSADLQEVTTLF
SRFLRNPRVQGAIRYQSPYWRGLAARRIQVGWRYWRKRLGRGGSSSPEHDHYSAYHHSPG
Y
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatctgaaagagatgtgacacacctgctatctgccactgattcacaagttgat
gaacaagatggctctcagttttgcaggcttacatataggagtgcatccttatctatcccc
atggactccacagaattcaatgacagtgaaaatagtcttgtaggtcgttctgtttatctg
gaaaatgaaaggaaaagttcatatttacagatgagtggtcctttatatattagtagcggg
gatggaattgtactggggcctatgcaaagtgcagtagcgcaacaaccaactgaggctcca
gtagtacggtatcctccattgaatggcagggagcgaaaagtttggccagataagagctat
gcatcgaagaatgatcatctcattaagtctggtcaacttggaatgtgcgatgatccttac
tgcacaacatgcccaagttattaccatctcaaggggcaacagaagaaatcaaaatcatcg
gacatgctggattacaagttccacaatatgatctatggagatgcaaaaggctgggcaaag
aaagtttcttcttttcttggtccttttattccacctatcatgaatcctcatgcaaaagtt
gttcagcagtggaaccagttctttttcgtttcttgcttgtttgcagttttcctggaccct
ttgttcttctttttgttgtacgtaaatcaggataacaaatgtatactacttaattggccc
atgacaacaacaattgtggctttgaggagcatgactgattttttgtacttaattcacgtc
cttcttcagttcaggcttgcttatgttgctcctgaatctagagtggtgggtgctggagac
ctagttgaccatccaaaaaagattgcgcttcattatctttctggatatttccttattgac
ttatttgttgtattaccacttccacaaatcattatattggctgtcttacccaattccatt
ggatcatctggtgcaaattatgcaaaaaatcttctgcgggcagcaattttagctcagtac
attccaaggttgtacagggttctgcccttgcttgctggtcagtcttcaaccggtttcata
tttgagtcagcatgggcaaatttcgttataaatcttctaatgtttatgttgtctagtcat
gtcgtgggatcgtgctggtatctctttgggctgcagagggtgaatcaatgccttcgagat
gcctgtcatgactctggaattgcaaggtgcatggacttcatagattgcgggcatgggaat
gatcgtagctggttcgcttcagatccaacatgggatctgtggaagaataatgccaatgca
acagcttgttttggaggtggaaatttctcctttggaatctatgctcaatctgtagacctg
accacaacagaaaatgtcatcactagatacatatactcattgttctggggattccagcaa
ataagcacattggctggaaatcaagttcctagctattttgtttgggaagttcttttcacg
atggccatcattggacttggtcttctgctgtttgctttgctgattggaaatatgcaaaac
tttctccagtctcttggacgtaggaagttagaaatgtctcttagacgacgtgatgttgag
cagtggatgagccatcgacgcttgcctgaagaactgagaaggaaagttctagaagcagaa
cgttttagttgggcttcaacgagaggtgtgaatgaggaaacactattggagaatctgcct
gaagacctccaaatagatatacggcgtcatctttgcaattttgtcaagaaagtccgtata
ttcactcttgtggaggagcccatattagacgccatttgtgagaggcttaaacaaaaaatt
tacataaaaggaagcaaagttttgcaccgtggaggccttgttgacaaaatggtcttcata
gtccgtggaaaaattgagaacattggagaagacggatatcaagttcccttatctgaaggc
gatgttattggggaagaacttcttacatggtgccttgagcagtcttctgtaagcaaagat
ggaaaaaagctcaggtttccaggacccaacatgataagcaatcgagaagtaaggtgctta
acaaatgtagaggcatttgtattgcgatctgcagatcttcaagaagtcactactctgttt
tcgagatttttaaggaacccacgtgttcaaggtgctataaggtatcaatctccttactgg
cgaggcctcgccgcaaggcgtatccaagtgggatggaggtattggaggaagcgacttggc
cgcggaggctcctccagcccagaacacgaccattattcagcataccaccattctccggga
tactga
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