Coffea arabica (coffee): 113740268
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Entry
113740268 CDS
T11342
Name
(RefSeq) two-component response regulator-like APRR1
KO
K12127
pseudo-response regulator 1
Organism
carb Coffea arabica (coffee)
Pathway
carb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
113740268
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
Jas_motif
Motif
Other DBs
NCBI-GeneID:
113740268
NCBI-ProteinID:
XP_027123632
UniProt:
A0A6P6XCD5
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Position
4c:complement(48585521..48591414)
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AA seq
543 aa
AA seq
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MEKGDIGKSGDGFIDRSKVRILLCDNDSKSSKEVSTLLCKCSYQVTSVRSPRQVIDALNA
EGPDIDIILSEVDLPMSKGLKLLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADY
LVKPLRTNELLNLWTHMWRRRRTLGLAEKNILNYDFDQVVSDPSDANTNSTTLFSDDTDD
KSRKSVNPEACASIHQEEEQNPSSADAPVETVIIVTSECLPDVPGMSDRRTGQIASFPKK
SELKIGESSAFFTYVKSSLPKSNCQDGAPLHENVCQHLTIEENLNAQGGHINTDSQVTIT
NDALQNRSNGEGCPSNDSIHDSFSVERSCTPPLSLEFLQQRNLNEFSQVPTHPRNEPHHD
VSGFHPHSAYPYYISGVMNQVIVPPSPMYQKNLPDVHSHSPMLPQYGHIPQCSPHVPGMA
SFPYYQVGICLQTGQLPTTHPWPSYGSSSSAEGNASKIDRREAALMKFRQKRKERCFDKK
IRYVNRKRLAERRPRVRGQFVRKINGVTVDLNGQPASADDEDDEEEDEDEEDQVTNLDSS
PDE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggtgatatagggaagagtggagatgggtttatagataggagtaaagtcagg
attttactatgtgataatgattccaagagctctaaggaggtttctacacttttgtgtaaa
tgttcttaccaagtgacttctgtgagatcacccagacaagtgattgatgcactgaatgct
gaggggcctgatatagatatcattctttctgaagttgaccttcctatgtccaagggattg
aaacttttgaaatacattatgagggataaagaattgcgacgtataccagtcatcatgatg
tcagcgcaagacgaggtttctattgttgtcaagtgcttgaaatttggagcagctgactat
cttgtgaagccattgcgcacaaatgaactattgaacttgtggactcacatgtggagaaga
aggcgaacacttggactagcggagaagaacatactgaattatgattttgaccaggtcgta
tcagaccctagtgatgctaacacaaacagtactactttattttctgatgacactgatgac
aaatcccgaaaaagtgttaatccagaagcatgtgcatcaatccatcaggaagaagagcaa
aatccttcaagtgcagatgctcctgtagagactgttattattgtcacatcagagtgtctc
cctgatgtgcctggaatgagtgatcgaaggacagggcaaattgcctcatttccaaagaag
agtgagctaaagattggcgaatcttctgccttctttacatatgtaaaatcaagcttgcca
aaaagcaactgccaggatggtgccccattgcatgaaaatgtgtgtcagcatttgacaatt
gaagagaatcttaatgcacaaggtggccatatcaatactgattctcaagtaactattact
aatgatgctcttcagaaccgttccaatggagaaggttgtcctagtaatgacagcatccat
gattccttttctgtggaaaggtcctgtacaccacctttgtcactggaattcttgcaacaa
aggaacttaaatgagttctctcaggtgcctacacatccaagaaatgagcctcaccatgat
gtttcagggtttcacccacacagtgcttatccatattatatttcaggagtaatgaatcaa
gttatagtgccaccttccccaatgtatcaaaagaacctaccagatgtacatagtcattca
cctatgttacctcaatatggccatatcccgcagtgttctccccatgtgccagggatggca
tcatttccctactaccaagttggaatatgcctacaaacaggccaactacctacaacacat
ccatggccatcatacggaagttcttcttctgctgaagggaatgcaagtaaaattgaccgt
cgggaggcagccttgatgaagttcaggcagaaaaggaaggaaaggtgctttgacaagaaa
atcaggtatgtcaatagaaagaggctcgcagaaaggagacctcgtgtacggggacaattt
gtaaggaaaataaatggtgttactgtggatctcaatggacaaccagcttcagcagatgat
gaagatgatgaagaggaggatgaagatgaggaggaccaagtaactaacttggattcatca
cctgatgaatga
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