Coffea arabica (coffee): 113740687
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Entry
113740687 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113740687
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113740687
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
LRR_RPS2
DUF7885
WHD_MCM
HTH_NDX
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
113740687
NCBI-ProteinID:
XP_071902540
UniProt:
A0ABM4U5J1
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Position
4e:complement(9151959..9157613)
Genome browser
AA seq
580 aa
AA seq
DB search
MENMDNHALNSCTELEVEVYFGWLYISFRGSICIVLPDGLQVLRTFREAFLDISNAWGHG
ITSLSSFLSHHPYLSSLSLTDSSSSSSSFSSHHLLQSVAFSCPNLRHLRFFAEPVSGFSL
LSLSNSCPHLSSLTITLSRPLCFQWLAPLRALKELSVFIIGSETELFSYNGFASVLDVEL
NLESLSLCGSRGVDYGLNFLWRNCKKLEKLKLKSCECVGDNVSFSAFIKGLETLKEMELR
TSRTLADGVLLKLAEGSVSLSSLLVDDGGTKVGSLQLISQCRADVQKLDLRLPLDLDNDH
LIAVAENFENEIKKGMEYEKQKQHQEERQKPQLLMEGQNIHGGNLNNGDDMFVKVMTDEQ
MEILGKQIAAYATICEQLEDLHRALISQNDPSHFMLRNPYLTPLMTTSSLHRIPRRQRWN
PTAQQLQILERVFDQGNETPSKEKVKDITAELAKHGQISESNVYNWFQNRRARMKKKQVV
VEKKKTEPETQMVTESSLEEGEKLKPSEPMIEGQNYCVQKVSAGNSIFSFDEQGMEMQQP
LFAIEGFHRGMSSDKAKIHYLLEDMDVNPPGCYDPYIHAE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatggataatcatgctcttaattcttgtactgagcttgaagttgaagtatat
ttcgggtggctttacatttccttccgaggatccatctgcatagttttaccagatggcctt
caagttttgaggactttcagggaagcctttttggatatctcaaacgcttggggtcatggg
atcacatctctctcctctttcctctcccaccatccctatctctcttctctatcgctcacc
gactcctcttcttcctcctcctccttttcctcccatcacctccttcagtccgtcgccttt
tcttgccccaatctccgtcacctccgcttctttgctgagcccgtttctgggttctctctg
ctttccctttccaattcttgccctcatctctcttcgctcaccatcactctctccagacct
ctctgtttccagtggctcgcacctctccgcgctcttaaagagctctcggtctttataatc
ggaagtgaaaccgaattgttcagctacaacggcttcgcttcagttcttgatgttgaactc
aatttagagtctctttccctgtgtggaagtcgaggggttgattatggcctcaattttcta
tggaggaattgcaagaaactggagaaattgaagctgaaaagctgtgagtgcgtgggagat
aacgtgtctttttcagcatttatcaagggattggagactctcaaagaaatggaattgagg
acttctaggactctagcggatggggttttattaaaattagcagagggctctgtttcttta
agttctttgctggtcgacgatggcggtactaaagtgggctcgcttcaattaattagtcaa
tgcagggctgacgtgcaaaaacttgatttgaggttgcctcttgatctcgacaacgatcat
ctgatagcagtggctgagaattttgagaatgaaatcaaaaaaggtatggagtatgaaaaa
cagaagcaacatcaagaagaacgacaaaagcctcaactactaatggagggacagaatatt
catggtggaaatttgaacaatggagatgacatgtttgtgaaggtgatgactgatgagcag
atggaaatcctcgggaagcaaattgctgcttatgcaaccatctgcgagcaactagaagat
ttgcatagagccctcatctcgcagaatgatccttcgcatttcatgctgagaaatccgtat
cttaccccgttgatgacaacttcttccctccataggattcctcgaagacagcgttggaat
ccaactgctcagcagcttcagattcttgaacgtgtttttgatcaaggcaatgagactcca
tcaaaggagaaggttaaagatatcactgctgaattggcaaaacatggccaaatttctgaa
tcaaatgtctacaattggttccaaaatcgtcgcgctcgaatgaaaaagaagcaagttgtg
gttgagaagaaaaagactgaaccagaaacgcagatggtcactgaatcatcactggaggag
ggagaaaagttgaagccatcggagcccatgatcgaaggccaaaattactgtgttcagaag
gtaagtgctgggaactcaatattttcctttgatgaacaagggatggaaatgcagcagccc
ttgtttgccatagagggcttccatcgaggcatgtcatcagacaaagcgaaaatacattac
ttacttgaagatatggatgtgaatccaccagggtgctatgacccttatattcatgcagaa
tag
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