Coffea arabica (coffee): 113741117
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Entry
113741117 CDS
T11342
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113741117
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113741117
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113741117
NCBI-ProteinID:
XP_027124398
UniProt:
A0A6P6X9G8
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Position
4e:complement(47588387..47590267)
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AA seq
435 aa
AA seq
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MDFKKSSLILAFALIALVYTIEAHIAEFDEVWQKRSEEAKEAARQAYHPNPENVTSHFNE
KVHRSIDGHNSRRRDLHKYNGPCTATNPIDQCWRCQKNWRKNRMKLADCALGFGRHATGG
KGGRIYKVTDPSDNDLVNPKPGTLRHALIQPEPLWVIFTKNMVIRLSQELIMTSNKTIDG
RGVQVHIAYGAGFTLQFVHNIIIHNLHIHDIKAGNGGMIRDSVNHYGIRSRSDGDGISIY
GSTNIWIDHISMSNCNDGLIDAVQASTAITISNGHFTHHNEAMLFGASDSYSDDSIMQIT
LAFNHFGQGIEQRMPRARWGFVHVVNNDYTHWLMYAIGGSQHPTILSQGNRFIAPENPYA
KEVTKRDYAPESVWKDWVWKSQGDLMMNGAFFVQSGDPNHNFGSNADLIGPKPGEFANRL
TRFAGALNCIAKRPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaagaaaagtagcttaattttagcatttgctcttattgctctggtttatacc
attgaggcacacattgccgagtttgatgaggtctggcagaagcgctcagaagaagcaaag
gaggctgctcgccaagcttaccatcctaaccccgaaaatgtcacttctcattttaatgag
aaagtccataggtccattgatggccacaacagcagaagaagggacttgcacaagtataat
ggtccatgcacagccacaaaccctattgatcaatgttggagatgccagaaaaattggcgt
aaaaatcgtatgaagctagctgattgtgctcttggcttcggccgccatgcaactggaggc
aaaggtggcaggatttataaggtcactgatccttctgataatgacctagtcaatcccaag
cccggaactttaagacatgcccttatccagcctgagcccctttgggtcatattcaccaag
aatatggtgatcaggcttagccaagagcttatcatgaccagcaacaagacgatcgatggc
cgcggcgtacaagtccatattgcatatggtgctggattcaccctgcaattcgtgcataac
attatcatccacaatcttcacattcatgacattaaggctggcaatggtggcatgattaga
gactctgtcaatcattatggcattcgttcaagaagtgatggagatggcatttcaatctac
ggttccaccaacatttggatcgatcacatctcaatgtctaattgcaatgatggactcatt
gatgctgttcaggcttccacagctataaccatctccaatggccatttcactcatcacaat
gaggcaatgctctttggtgcaagtgatagctactcagatgattccataatgcaaataact
cttgcattcaaccactttggtcaaggaatagaacaaagaatgccaagggctagatggggt
ttcgtgcatgtagtgaacaatgattacacacattggctaatgtatgccattggaggaagt
caacaccccactatacttagccaaggcaatcgcttcattgctcctgaaaatccatatgct
aaagaggtgaccaagagggactatgcaccagaaagtgtgtggaaagattgggtatggaaa
tcgcagggagatcttatgatgaatggagcattctttgttcaatcaggagatcccaatcac
aattttggttccaatgcagatttgatcggtccaaagcctggggaatttgccaataggctc
acacgttttgcaggagctctaaattgtatagccaaaaggccatgttaa
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