Coffea arabica (coffee): 113741181
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Entry
113741181 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
carb Coffea arabica (coffee)
Pathway
carb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113741181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113741181
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113741181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
NBCH_WD40
Beta-prop_Nup120_160
EIF3I
Motif
Other DBs
NCBI-GeneID:
113741181
NCBI-ProteinID:
XP_027124463
UniProt:
A0A6P6X9N1
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Position
4e:complement(3087006..3093101)
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AA seq
608 aa
AA seq
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MAKEKLKSLITAFNPDGSYLAILSPDGTLKVWNTSNGSKFAEWREIDDIANVSFSCMACS
FVGKMRRKERGTCLVAVGTNSGDLSVVNISVGQVMWKSSGRYPGGIASLTFRSKGSRIHA
IGNCGLASEIISETGELAREFKITKKSMVSAAYISDDKITAAIGQKIRILSLDDGREVLK
LSSNWDQLRCISSCDDAKFIVASGVGKKSIQVWRCNFGAGDVTNGLILSLKHRPLTIECK
NGCDGEDSLIVLSVSEAGTAYLWNMRSVSDDVNPSKISVKGNMEEADSLKKHCVSIIAAR
IHALETTGQVKALISFGSVDSPQFSVVDIPGPGQDVVITAANIDMQENGIQGDEGVSKQK
EKPKKKRAASDIETASRVAVIDNGYGDPKDGIQIDDDLNEPTMGEKLANLNLLEMDEAKS
NENIESSPRTKPPSADSVYILLKQALHADDRALLVDCLFRQDEKVIANSVSLLNPSDVLK
LLQSLVPIIESRGAVLVCALSWLRSLLLQHASGIMSQESSLLALNTLYQLIESRVSTFNQ
ALQLSSSLDLLHAGIVDEGEEENETITPAFYEDNSDEDTTGDAMETESDENGQEPENLSD
ISDFEAME
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagaagcttaaatccctaattacagctttcaaccctgatggtagctacctt
gctattctatcgccagatggaacccttaaggtgtggaacaccagtaatgggagtaaattc
gcagagtggagagagatagatgatattgccaatgttagtttttcatgtatggcttgcagc
tttgttggcaagatgcgcagaaaagagcgaggcacttgcttagtagccgtcggcacaaat
agcggtgacctttctgtggttaatatttcagttggtcaagtgatgtggaaatctagtggc
cgttaccctggtggaattgctagtcttacttttagaagtaagggaagtagaattcatgct
attggaaattgtggtctggcgtctgaaatcatctctgaaactggagaacttgctagagag
ttcaaaatcactaaaaaatctatggtatcagctgcatatatatctgatgataaaatcact
gctgcaattggtcagaagataagaattttaagtctggatgacgggagagaagtactgaag
ctttcatctaattgggatcagctgcgatgcatttccagttgtgatgatgccaagttcata
gttgcatctggagtaggcaagaaaagcatccaagtatggaggtgcaactttggtgcaggg
gatgttactaatggtcttattctttccctgaaacatcgtcccctgactatcgaatgcaag
aatggctgtgatggggaagatagtttgatagtcctctcagtttctgaggccggtacggct
tatttgtggaacatgagatctgtctctgatgatgtgaatccatctaaaatttctgtcaaa
ggcaatatggaagaagcagattccctcaaaaagcattgtgtatccataattgctgctaga
atacatgctctggagacaacaggacaagtaaaagctctcatttcatttggttccgtagat
tccccacaattttcggttgtagacattcctggaccaggtcaggatgttgtcataactgcc
gcaaatattgatatgcaagaaaatgggattcagggtgatgaaggtgtatcaaagcaaaaa
gaaaagccaaaaaagaagcgtgctgcatccgatattgagactgcaagcagagtagctgta
attgataatggttatggagatccaaaggatggtattcaaattgatgatgacttaaatgag
ccaacaatgggtgagaaacttgcaaatcttaatttactagagatggatgaagctaagagc
aatgagaatattgagtcctcccctcgcacaaagcctccaagtgctgattcagtttatatt
ctgcttaagcaagcactgcatgctgatgatcgagcacttctagtagattgtttatttaga
caagatgaaaaggtcattgcaaattcagtgtcactgttgaatccatcggatgttcttaag
cttttgcagtcccttgtacctataatcgagtctaggggggctgtcctggtttgtgctctt
tcatggctgagaagtttactactacaacatgcaagcggaataatgtcccaagaatcttct
ttacttgccttgaacactttatatcagctcatagaatctagagtttcaactttcaatcaa
gctcttcaactgtccagtagcttggacttacttcatgcaggaattgttgacgagggcgaa
gaagaaaatgaaaccataacaccggcattttacgaggacaacagcgatgaggatacgact
ggagatgccatggaaacagaaagtgatgagaatggccaagaaccagaaaatcttagtgac
atcagtgacttcgaagccatggagtga
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