Coffea arabica (coffee): 113741300
Help
Entry
113741300 CDS
T11342
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113741300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113741300
Enzymes [BR:
carb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
113741300
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
113741300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
YutD-like
Motif
Other DBs
NCBI-GeneID:
113741300
NCBI-ProteinID:
XP_027124596
UniProt:
A0A6P6XCJ4
LinkDB
All DBs
Position
4e
Genome browser
AA seq
844 aa
AA seq
DB search
MVGSDGSNGSMSPSPPQRQTRESAPKQYGVTKPLSQSGPSEADKLRTKELEKFLDDSGLY
ESAVEAVKREEVLTRLKQIVKDWVKEITRLRGYTDQMVEDANALILTFGSYRLGVHGPGA
DIDTLCVGPSYVMREDFFYVLHDILAEMEEVGELQPVPDAHVPVMKFKFDGISIDLLYAS
IDLLVVPDDLDISDVSVLHNVDEATGRSLNGCRVADHILKLVPNVKNFRTALRCLKFWAK
RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCEIED
NELGFSVWDPRKNHWDRGHHMPIITPAYPCMNSSYNVSASTLRVMMEQFQFGNKTCEEIE
LNKAQWSALFEPYLFFESYKNYLQVDIIAADVDDLRAWKGWVESRLRQLTLMIERDTYGK
LQCHPYPHDYVDSSKQRAHCAFFMGLQRKPGEVIQEGQQFDIRGTVDEFRHQITMYNFWK
PGMEIYVYHVRRKQIPSYVFPEGYKRSRPSRLTNQQLGDKSSEENGEIYRSGSTERCLRR
KRELEGSENNQSSPEKRQSISPWERDSISPENGDIYRSGSTERCLNRKRELEGSENNQVS
PEKRQSIRPQRRDSMSPDLLGVKNGIALNECSSTVLVRGMEGAEANGLCLSGSTSELLSD
NLTNGGTGIQRNERQQVEQQKEVSEELNKLNGDMLLVENGKAGYILDTSVLAHVNSELTS
KDVGSVSLAGNYDNNHGSRDGFKLQESSWVDSHKSDTKLLVNNNGENSAQLYGDELQELE
PNAAHHEVVLKSRDAVSSESVQKTVMRHVHQFLLLDSIMFICFLGHFCLYAAVCRLFYGH
FVAG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttcagatggttcgaatgggtccatgtcaccttcgccgccgcagcggcaaacg
cgggaatcggccccaaagcagtatggcgtcacaaaacccttgtctcagtctggaccctca
gaggcggataaattgagaactaaggagttggaaaagtttttggacgattctgggctatac
gagagtgctgtagaggctgtgaagagggaagaggttctaactcgactcaaacagattgtc
aaggattgggtgaaagagattactcgcttgcgaggttatactgatcagatggttgaggat
gctaatgcattgatattaacttttggttcttaccgactcggggtacacggtcctggagct
gacatagatacattatgtgttgggccatcatatgtgatgagggaggacttcttctatgtg
ttgcatgatatcttggctgagatggaagaagttggtgaattgcaaccagtaccagatgcg
catgtccccgtcatgaagttcaagtttgatggaatttcaattgatcttctttatgctagt
attgatcttttggttgtcccagatgatttggacatctctgacgtctcagttttgcataat
gttgacgaggcaactggacggagtctgaatggatgcagggtagcggatcatatacttaag
ctagttcctaatgttaagaatttccggacggctcttcgatgcttaaaattttgggcaaaa
aggcgtggtgtttattcaaatgtgactgggtttcttggtggtgtaaattgggctcttctt
gtggctcgtgtatgtcagctttatccaaatgcagtaccaagcatgctggtttcccgtttt
ttccgagtttacactcaatggcgctggccaaatccagttatgctttgtgaaatagaggac
aacgaacttggattctctgtttgggatcctcgaaaaaatcattgggatcgtggtcatcat
atgccaataataactcctgcttacccatgcatgaactcaagctacaatgtgtcagctagt
actctgagagttatgatggagcagttccaattcggtaacaagacatgcgaggagatcgag
ctgaataaagcccagtggagtgctctctttgagccgtatttgttttttgaaagctataaa
aactacttgcaggttgatattattgcagctgatgttgatgacctgcgggcctggaagggt
tgggttgaatctcgactaaggcagttgactctgatgatagaacgagacacatatgggaaa
ttacaatgtcatccatatccccatgactatgttgattcttcaaagcagcgtgcgcattgt
gcgttttttatgggtttgcagaggaagccaggagaggtgattcaggaaggtcagcaattt
gatatacgtggaacagttgatgagtttaggcatcagatcactatgtataatttctggaaa
ccgggcatggaaatatatgtgtatcatgtgcgtagaaaacagattccttcttatgtattt
cctgagggttacaaacgaagtcgaccttcaaggcttacaaatcagcagctgggtgataaa
tcatctgaagaaaatggagagatttacaggtctggatctactgaaagatgtctaagaagg
aaaagggaacttgaagggtcggagaacaatcaatcgagtcccgagaaaaggcagtcaatt
agtccttgggagagggattcaatatctcctgaaaacggagatatttacaggtcaggatct
actgaaagatgtctaaacaggaaaagggaacttgaaggatcagagaacaatcaagtgagt
cccgagaaaaggcagtcaattagacctcagcggcgggattcgatgtctcctgatctcctt
ggtgtaaaaaatggcattgcactgaatgagtgctcgtcgacagtgcttgtgagggggatg
gaaggtgctgaagccaatggactctgcctgagtggaagcacctcagaattgctttcagac
aatttgacaaatggaggcactggcatacaaaggaatgagaggcaacaggttgagcagcag
aaagaggtctctgaagagttgaataagctgaatggtgatatgcttttagtggagaatggt
aaagctggatatatcttagacaccagtgtattagcccatgtaaacagtgaactcaccagc
aaggatgttggatctgtgtctcttgcaggtaactatgacaacaaccatggaagtcgtgat
gggtttaaactccaggaatcttcatgggttgattctcacaaatcagataccaagttgctt
gtgaacaataatggggaaaatagtgcacagttatatggagatgaattgcaggagttagag
ccaaatgctgcccatcatgaagtggtgctgaagtccagggatgcagtcagctcggagtct
gttcagaaaacagtgatgaggcatgttcatcagtttttgttacttgattccattatgttt
atatgttttctgggccatttttgtctttatgctgctgtttgtcggttgttttatggccat
tttgtagccggttga
DBGET
integrated database retrieval system
