Coffea arabica (coffee): 113741442
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Entry
113741442 CDS
T11342
Name
(RefSeq) single-stranded DNA-binding protein, mitochondrial
KO
K03111
single-strand DNA-binding protein
Organism
carb Coffea arabica (coffee)
Pathway
carb03030
DNA replication
carb03430
Mismatch repair
carb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113741442
03430 Mismatch repair
113741442
03440 Homologous recombination
113741442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
113741442
03400 DNA repair and recombination proteins [BR:
carb03400
]
113741442
03029 Mitochondrial biogenesis [BR:
carb03029
]
113741442
DNA replication proteins [BR:
carb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
113741442
DNA repair and recombination proteins [BR:
carb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
113741442
TLS (translesion DNA synthesis) factors
Other SOS response factors
113741442
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
113741442
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-GeneID:
113741442
NCBI-ProteinID:
XP_027124774
UniProt:
A0A6P6XBU9
LinkDB
All DBs
Position
4e
Genome browser
AA seq
228 aa
AA seq
DB search
MASSLSRTLCRRLLLSNPRSKPSTFSYSFCSKSFSFVDASSESDEPSTVNSAHSDAESAA
PSSFSVSSSDSTKQQRVIRSRPLENGLDVGIYKAVLIGLVGQAPLQKKLRNGKAVTMLSL
GTGGIRNNRRPFDNEEPREFADRCAVQWHRVAVYPERLGALTVKHAVPGSVLYVEGNLET
KIFNDPITGLVRRIREIAIRRNGRLVFLGQGSDNQKPSQGDLRSVGYY
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcactctcaaggacactttgccgtagacttcttctctcaaaccccagatca
aagccctcgactttctcttattccttctgctcaaaaagcttttcttttgtggacgcctcc
tcagagtcggacgaaccctccactgtcaattcggcccattccgatgctgagtcagcggcc
ccctcttcattttctgtttcttcctcagactcaactaagcagcagcgcgtcattcggagt
cgtcccctcgaaaatgggttggatgttggcatttacaaggctgtattgattggtctggtg
gggcaggctcctcttcagaagaagttaaggaatgggaaggcagtcactatgctgtcactt
gggacaggtgggattcggaacaataggaggccatttgataatgaggagcctagagaattt
gcagataggtgtgcagttcaatggcacagggttgcagtttaccctgagaggttaggagcg
ctaactgtgaagcatgcagtaccaggatcagtcttgtacgtggaaggaaatctggagact
aagatatttaatgatccgataactggtctagttcgacgtatacgagagattgcaatacgc
cgaaatggtcggctggtgtttttgggacaaggaagtgataaccagaaaccatcacaagga
gatctgagaagtgttggctattattaa
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