Coffea arabica (coffee): 113741539
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Entry
113741539 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113741539
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113741539
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
113741539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
PhoH
AAA_11
Motif
Other DBs
NCBI-GeneID:
113741539
NCBI-ProteinID:
XP_027124875
UniProt:
A0A6P6XAT9
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All DBs
Position
4c:2471817..2476713
Genome browser
AA seq
908 aa
AA seq
DB search
MEEDGEMQFPAFPHKPYSIQIDFMKALYQSLQKGGIAMLESPTGTGKTLSIICSALQWLV
DKRQQNLDPAKDGSDSNQNLKDEDPPGSDGEPDWMRKFTVNKESESPQDRKTKIKNFRSK
KWNKKGKEECSTIRDIFNRTGVGGDEDVDEREVKASKLKSGIEEVEDHEFLVEDYESEGE
DGVKLKKRDGGGYSVDSSSEEDGQEDGFDEKEQDSRPKIYFCSRTHSQLSQFIKELRKTK
FASELKVVSLGSRKNFCINEEVLRLGNTTSINERCLELQKAKSKRASKMMNLSAGRRVRR
MKASSGCPMLRSRKAEREFWSETSHQGPLDIEDLVKVGHKVGTCPYYGSRSMVPTADLVI
LPYQSLLSKTSRESLNLSLKNNIIIIDEAHNLADSLISMYDVKITSSQLERIHSHLEKYL
ERFQNLLGPGNRRYIQTLMVLTHAFLQSVAYPNGANYVDPLSSGGEVQSDLDFSIGINEF
LFSLNIDNINLVKLLHYIEESNIIHKVSGFGDKLAMLQNDVELEGTTAEASTLSGFRALV
SLLSSLTNNDGDGRIIISRARVISSVHERGYLKYVMLTGEKIFSEVASEAHAIILAGGTL
QPIEEIKERLFPWLQPDQLHFFSCGHIIPPTNILPVAVSQGPSGQSFDFSYSGRSSSSMI
EELGMLLCNLVAVVPEGIVVFFSSFDYEGKVYEAWKESGILARIMKKKHLFREPRKNTDV
ELVLKEYKETIDELSSTNAKYDPAPCSGAVLLAVVGGKISEGINLSDGMGRCIVMVGLPY
PSPSDMELMERVKYIEGLESSLISKTQARLDILKCCKHRGRQYYENICMKAVNQSIGRAI
RHINDYAAILLVDARYASDPSRRSFSHVCDKLPQWIRSHLIPSPKNYGAVHRLLHQFFKF
HRKETSNR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacggggaaatgcagtttccagcattcccgcataagccctactccattcag
atcgatttcatgaaggccctttaccagtccctccagaaaggaggcattgccatgctcgaa
agtcccactggaactggcaaaacattaagtataatttgcagtgctttgcagtggcttgtt
gataagaggcaacaaaatcttgaccctgccaaagatgggtctgattcaaatcaaaattta
aaagatgaggatcctccaggttcggatggtgagcccgattggatgagaaaatttactgtg
aataaagaaagcgagtcccctcaagataggaagacaaaaataaaaaattttagatcgaag
aaatggaataagaagggaaaagaggaatgcagtaccattagagatatatttaaccgtact
ggggttgggggagatgaagatgttgatgagagagaggtaaaagcttcgaaattgaagagt
gggatcgaggaggtcgaggatcatgagtttttggtggaggactatgagagcgaaggcgaa
gatggtgtaaagttgaaaaagagggatggtggtggttattcagttgattcatcgagcgag
gaggatggacaggaagatgggtttgacgagaaggaacaagactcaagaccgaagatttac
ttttgcagccgaactcattcacagctttctcagttcataaaggagttgaggaagactaag
tttgctagtgagttgaaggtcgttagtttggggtcaaggaagaatttctgcatcaatgaa
gaggtattaagactaggtaatacaacaagcataaatgagagatgtttggagcttcaaaag
gccaagagcaaaagagcatccaaaatgatgaacttaagtgctgggagaagagtccggagg
atgaaggcctcctctggatgcccaatgcttcgaagtcgcaaagcagaacgagaattttgg
agcgagacatctcatcagggtcccctggatattgaagatcttgttaaggttgggcacaaa
gtaggcacttgcccttattatggttcaagaagtatggtaccgaccgcagatcttgtgatt
cttccataccaatctcttctgtcaaaaacgtctcgggaatcacttaatttaagtttgaag
aacaatattatcatcatagatgaggctcataacctggctgattctctcattagcatgtat
gatgtgaaaattacttcttcacagttagagcgtatacattcccacttggagaagtatctt
gagcgattccaaaatctcttaggaccaggcaatcgaagatatattcagacactgatggta
ctcactcatgcttttctacaatccgtagcttatccgaacggtgcaaactatgttgatcct
ttaagcagtggcggtgaagttcaaagtgaccttgacttttctattggtataaatgagttt
ctattttccctgaacatcgacaacataaacctggttaaacttctacactacatagaagaa
agcaacattatccacaaggtcagtggatttggagataaactggctatgttgcagaatgat
gttgaacttgaaggaactacggcagaagcaagcactttatctggctttcgggcattggtt
agtctgttgtcatcgttaacaaataatgatggtgatgggaggataattatttcaagggca
agagtaatatcttcagtacatgagaggggatatttgaagtacgtgatgcttactggggaa
aagattttttctgaggttgcaagtgaggcacatgctatcatcctggctggaggcacttta
caacctatagaggaaattaaagagcgacttttcccatggttacaacctgatcagttgcac
ttcttttcctgtggtcatataattcctcctacaaatattttacctgttgctgtttcacaa
gggccatctggtcagtcctttgattttagctacagtggaagaagctcctcaagcatgatt
gaagagctagggatgttgctctgtaatttggtagctgtggttcctgaaggaattgttgtc
ttcttctcatcatttgactacgagggcaaggtctatgaggcatggaaagaatctggcatc
cttgcaaggatcatgaagaagaagcacttattcagagagcccaggaagaatacagatgtg
gaacttgtcctgaaggagtacaaggaaacaattgatgaattgtcgagtacaaatgccaaa
tacgatcctgcaccatgcagtggtgctgttctcctcgccgttgtgggtggtaagatatcg
gaaggtatcaacttaagtgatgggatgggccgatgcatagtcatggttggactgccctat
cctagcccgtcagatatggagctgatggagagggtgaagtatattgaaggacttgagagt
tcacttatcagcaaaacccaggcacggttagacatcctaaaatgttgcaagcacagggga
agacagtattacgaaaatatttgcatgaaagcggttaatcaatctattggtagagcaatt
cgtcacataaatgattatgcagcaatattgttggttgacgcacgatatgcatctgatccg
tcaagaaggagcttttcccacgtttgtgacaagctccctcagtggattaggagccatctt
attccctcacctaagaactatggagcagtccatagactgttgcaccagttcttcaagttt
catagaaaggaaacgagtaatcggtag
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