Coffea arabica (coffee): 113741749
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Entry
113741749 CDS
T11342
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113741749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113741749
03036 Chromosome and associated proteins [BR:
carb03036
]
113741749
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113741749
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113741749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
PLS
Motif
Other DBs
NCBI-GeneID:
113741749
NCBI-ProteinID:
XP_071903018
UniProt:
A0ABM4U6X0
LinkDB
All DBs
Position
4e
Genome browser
AA seq
1089 aa
AA seq
DB search
MQLKTLSTVHRLGFEALIRMEDVDMEASPSYFDPEDLSIREQFRRYGKRHSGSSLSPQHD
SAASKLSEIRSNAALFLEDIKQEAEGLDMDDGGTPLNAFSKRRSFIDDQGPSELDFGSGI
RSLQTLKQEEDRLVDSGDTTFSLFASLLDSALQGLMTIPDLILRFESACREVSESIRPGS
NERLRIVEDKLMRQKARLLLDEAASWSLLWYLYGKGSEDIPEDLILFPTTSHLEACQFVA
ANHTAQLCLRIIQWLEGLASKALDLENKVQGSHVGTYLPKSGIWHHTQRFLKKGASNLKT
VHHLDFDAPTREHAQLLPDDKKHDESLLEDVWTLLRAGRLEEACNLCQSAGQPWRAATLC
PFGGFDLFPSIESLVKNGKSRVLQAIELESGIGHQYRLWKWASYCASEQIAKQDGGKYEM
AVYASQCSNLKRILPICMDWESACWAMAKSWLDVQVDKELARLQPGGMDQFKSYEEAIEE
TPEQGDGGQQIAGPDNWPLQVLNQQPRHLAALLQKLHSSDTVHEAVTRACKEQQRLIEMN
LMSGDMPCLLDLIWSWISPSDDDQNVFRPHGDPQMMRFGAHLVLVLRYLLADQMKDDFRE
KIMTVGDLILHMYTMFLFSKQHEELVGIYASQLARHRCIDLFVHMMELRLNSSVHVRYKI
FLAAIEYLPFSAGDDSKGSFEEIIERILLRSREITVGKYDKLSDIAEQHRLQSLQKAMVI
QWLCFTPPSTIKDAKDVSSKLLLRALVHSNVLFREFALISMWRVPANSIGAHTLLSLLAE
PLKEPTETLLSTEDHHLTENLREFEDWNEYYSCDATYRNWLKVELENSEVPPRELSVEEK
TRALTAAKETLVSSLLLLQRKEAPWLVPTQDRIYESEEPVYLELHATAMLCLPSGECLSP
DATLCTTLTSALYSSVSEEEVLKRQLMVSVSRSARDEYSIEVILRCLAVAGDGLGIHEVN
DGGLLSTVLAAGFKGELVRFQAGVTLEISRLDAWYSSSLGSLEGPATYIVRGLCRRCCIP
EIALRCMQVSVSLVEAGNPAESHDELIDLVSCAETGFLHLFSQQQMQEFLLFEREYSIHK
MELLEDNFS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaagacactgtctactgttcacagattagggttcgaagctttaatcagaatg
gaagatgtggatatggaggcttctccgagctactttgaccccgaagatctcagcatcaga
gagcaatttcgtcgatacgggaaaaggcattcagggtcaagcttatcacctcaacatgat
agcgccgcttctaagctgagcgagatcaggtcaaatgctgcactttttcttgaagatata
aaacaggaggctgagggccttgacatggatgatggaggaacacctcttaatgctttttcc
aagaggagatcgttcattgatgatcagggaccatctgaactggactttggaagtggaatt
cgttctctacaaactctcaagcaggaagaggatagactggttgatagtggtgacacaacc
ttttctctgtttgcttctctacttgattctgcacttcaagggttgatgactattcctgat
ttgatattgcgatttgaaagtgcttgtcgtgaagtttcagagtcaatcaggcctggctcc
aatgaaagacttaggattgtagaggataaactgatgaggcagaaagccagactgttgctt
gatgaagctgcttcttggtctctgctgtggtatctatatggaaaaggaagtgaagacatt
ccagaagatctaatcctgttcccaacaacttcgcatttggaggcttgtcagtttgttgca
gcaaatcataccgcgcagttatgcctccggatcattcagtggcttgaggggttggcctcc
aaggcccttgatttggagaacaaggtccaaggttctcatgtgggtacctatcttcctaaa
tctggaatatggcatcatacccaacggtttctgaagaaaggtgcctcaaatctaaagact
gttcatcacttagattttgatgctccaacacgtgaacatgcacaactattaccagatgac
aagaaacatgatgaatctcttctggaagatgtctggactttattgagggcaggaagacta
gaggaggcatgcaacctttgccagtctgccggccagccatggagggctgcaactctctgc
ccatttggaggatttgaccttttcccatccattgaaagcctggtaaaaaatggcaagagc
agagtcctgcaggccattgaattggaaagtggtattggccatcaatatcgcctctggaaa
tgggcttcttattgtgcatcggagcaaattgccaagcaagatggtgggaagtacgaaatg
gcagtatatgcatcacagtgtagtaacttgaagcgcattcttccaatttgtatggactgg
gagtctgcctgctgggcaatggccaaatcttggcttgatgtccaggttgataaggaattg
gcacgcttgcaacctgggggaatggatcaatttaaaagttatgaagaagctattgaggaa
actccagaacaaggggatggtggtcagcaaatagctggaccagataactggccccttcag
gttttaaatcagcaacccagacacctagctgcactgcttcagaaactccattcgagtgac
actgtgcatgaagctgttacacgagcatgcaaggagcaacagaggctaattgagatgaat
cttatgtcaggagacatgccatgcttgcttgatctcatatggtcatggatatctccttca
gacgatgaccaaaatgtcttcaggccacatggcgatccccagatgatgcgttttggggca
catttagtgcttgtgcttagatatttgcttgcagatcagatgaaggatgatttcagagag
aaaatcatgacagttggtgatctcatccttcacatgtatactatgtttctattctcaaag
caacatgaggaattggttgggatatatgcatctcagcttgcacgccatcgttgcattgat
ctctttgtgcatatgatggagttacggcttaatagcagcgtgcatgtcaggtataagata
tttcttgctgccattgagtacttgcctttttcagctggagatgactctaaaggcagcttt
gaagaaatcattgagaggattttgttgagatctcgagaaattacagttggaaaatatgat
aaactatcagatattgcagaacagcaccgtttgcagagtcttcaaaaagctatggttatt
caatggctttgctttacacctccctccacaatcaaagatgctaaggatgttagttccaaa
cttcttctccgggcattggttcatagcaacgttctgtttcgggaatttgctctcatctca
atgtggagggttccagcgaattcaattggggcccacacactgcttagtttacttgctgag
cccttgaaagagccaactgaaactctcctttctacagaggatcatcatcttacagagaat
ttgcgagagtttgaggactggaatgaatactactcgtgtgatgcaacataccggaactgg
ctaaaagttgagttagaaaattcagaggttcctccccgtgaactttcagttgaggaaaag
acaagggcacttacagcagccaaagaaactctggtgtcatcccttttattgttacaaaga
aaagaagctccttggttggttccaacccaagatcgaatttacgaatctgaggaacctgta
taccttgaattacatgccactgcgatgctctgtctaccctctggtgaatgcttgtctccg
gatgccactttgtgcacaaccttaacaagtgctttgtactcttcggtgagcgaggaagaa
gtgttgaaacgtcaactcatggtgagtgtctctaggtcagcgagggatgagtactccatt
gaggtgatactacgctgtttagcagtagcaggcgatgggctagggatacacgaggtcaac
gatggtggtctcctatctactgtgcttgctgcgggcttcaaaggtgagctggttaggttt
caagccggagtaactttggaaatctctagattagatgcttggtattcaagcagtcttggg
tctttggaaggtccagcaacatacattgttcgaggcctttgccgtagatgctgcattccg
gaaatagctcttcggtgtatgcaggtttccgtttccctcgtggaggccggcaatccagcc
gaaagccatgatgaattaattgatctagtctcatgtgctgaaactggatttcttcattta
tttagtcagcagcagatgcaggaatttttgttatttgaaagagaatactcaattcataaa
atggagcttctggaagataatttttcctga
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