Coffea arabica (coffee): 113741766
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Entry
113741766 CDS
T11342
Name
(RefSeq) protein ENHANCER OF LHP1 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113741766
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
113741766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Ctf4_C
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_WDR35_TULP_N
Tricorn_2nd
WD40_MABP1-WDR62_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_HPS5
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_ELP1_1st
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_VPS8
B-prop_COPA_B_2nd
Beta-prop_SCAP
PD40
Histone_HNS_N
DUF7099
Motif
Other DBs
NCBI-GeneID:
113741766
NCBI-ProteinID:
XP_027125188
UniProt:
A0A6P6XBN7
LinkDB
All DBs
Position
4e:complement(6687166..6692858)
Genome browser
AA seq
963 aa
AA seq
DB search
MKIRTIKLREAHKNGENGGNSFCSILWDQQGDRIVTASSSDPSIWVHDAQFPSVNPKSIK
HHRDGVTALALSPNFTCLASGSIDHSVKLYKFPGGEFETNITRFTLPIRALAFNKSGTML
AAAGDDEGIKLINTIDGSIARVLKGHKGSITGLAFDPKSEYFASVDSTGTVIHWELQPGT
ILNTLKGIAPATFSDQSAMNMLSWSPDGDLLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ
PICFLSWSPNGRYMATSGSDRQIIIWDVDKKQDIDRQKFSDRISCMAWKPHGNALAVIDS
KGKYGVWESPVPSSMKSPTEDIPNVRSNGLLLFDEDEEEASASGSLSDLGEDSLGEPELS
SRKRLRKNSTLDDSWGEDINDELDLHPKVESHKKASKSKKDSIDHEKHEIKNSMTYSAPK
MQEAFQPGATPVQPGKRRFLCYNMLGSVTSMDHDGYSHIEIDFHDTSSGPRVPAMTDYFG
FTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWASNSEWSMRLEEEEVRAVALGTTWVA
AATSLNFLRIFSDSGLQRYILSLDGPVVTLVGLKDELAVVTHSSPALPSDGQMLEFRVLN
VRSATESLRGRLPLTPGSYLTWFGFSEEGQLGSFDSKGVLRVYTNQYGGSWFPVFSSSKL
KKPDENYWVVGLNATKLFCVVCKSPYSFPQATPKPILTLLDLSFPLAASDLGAENLENEF
ILNNMHLHQIQKRIEENAAAGRDTASIDDEAFTIEAALDRCILRLIASCCNGDKLVRATE
LVKLLSMEKSVKGAIKLVTALKLPNLAERFSTILEERMSNEAMGSTVLHGNFKFDAPVQA
DDVFQRPSLPESSTEKAVLPFPPQRSSTPSFPKEEKTEQPPNAGNGIVEPTRALRVGKTV
EVKNAGEAKDVKEAINPVKKQPEEIPVSFNRPSNPFAKKSNRQEHSSLFDSIKKMKTDAT
GKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccgaactattaagctcagagaagctcacaagaacggcgaaaatggcggcaac
tcattctgctcgattttgtgggaccagcagggggaccgcattgtaacggcgtcgtcttcc
gatccgtcaatctgggttcacgacgcccaatttccgtcggttaaccctaaatctatcaaa
caccaccgcgacggcgtcaccgctttggctcttagccccaatttcacctgcctggcttcc
ggatctattgaccattccgttaagctctacaaatttcctggtggggagtttgagactaat
atcactagattcacattgccaatacgggcacttgctttcaataaatcgggtaccatgctg
gcagctgctggtgatgatgaagggatcaaacttatcaacacaattgatggttcaatagca
agagttcttaaagggcataaaggatctattactggcttagcttttgatcctaagagtgaa
tattttgcttcagttgattcaacagggactgtcatacactgggaactccagcctggaaca
atacttaacacgctcaagggcatagcgcctgccactttttctgatcaatctgctatgaat
atgcttagctggagtccagatggggacctgttggctgtcccaggtttgaaaaacgatgtg
gtgatgtatgatagggacactgctgaaaaacttttttcactgagaggtgatcatgtgcaa
ccaatttgtttcttgtcctggtcgcctaatgggcgatacatggctacctctggttcagat
agacagattatcatttgggatgttgacaaaaagcaggacattgatcggcagaaattcagt
gataggatatcttgtatggcttggaaaccacatggtaatgctttggcagtaattgacagt
aagggaaagtatggagtatgggaatcaccagtaccatcatcaatgaaatccccaactgaa
gacatacccaatgtgcgttccaatggccttcttctgtttgatgaagacgaggaagaagct
agtgcatctggtagtttgagtgatcttggtgaggacagtcttggtgaacctgaattatca
agcagaaaaaggttgcgcaaaaattctacacttgatgatagttggggagaagacatcaat
gatgagttggatttgcatccaaaggtggaatctcacaaaaaggcttctaaaagcaaaaag
gatagcattgatcacgagaagcatgaaataaaaaatagtatgacctattctgcacctaaa
atgcaagaagcttttcaacccggagctacacctgtgcagcctggaaaaaggcgtttcctg
tgttataacatgttaggcagtgtgacctcaatggatcatgatgggtattcccacatagag
attgactttcatgatacaagtagtggtcctcgagtgcctgcaatgactgattactttggc
ttcacaatggcatctttaaatgagaacggaagtgtttttgcaaatccatgcaagggcgag
aagaatatgagcacacttatgtatcgcccattcagtagctgggccagtaatagtgagtgg
tctatgagacttgaagaagaagaagtaagggcagtggctcttggaactacttgggttgct
gctgctactagtcttaattttcttcgtatcttcagtgacagtggcttgcagaggtatatc
ctttcacttgatggaccagtggtgaccttagttggacttaaggatgaacttgctgttgtt
acacattcttctcctgcacttccctcagatggacagatgcttgagttcagggtattgaac
gttcgtagtgcaacagagtctctcagagggcgacttccgttgactcccggatcataccta
acgtggtttggtttcagtgaagaaggccaacttggttcttttgattctaagggtgtcttg
agagtttatacaaatcaatatggaggaagttggtttccagtttttagttccagtaaattg
aagaagccagatgaaaactattgggttgttggattaaacgcaacaaagctgttttgcgtg
gtttgcaaatcaccttattcattcccacaggccactcccaaaccaattctcacgctgtta
gatctttcatttccacttgctgcttctgaccttggagctgaaaacctggagaatgaattt
atattgaataacatgcatctgcaccagattcagaaaagaattgaagaaaatgcagctgct
ggcagggacacagcttcaatcgatgatgaggcattcactattgaagcagctcttgatagg
tgcatcttgaggcttattgcatcatgctgcaatggtgacaagcttgtgagagccactgaa
cttgtgaagcttctttcgatggaaaaatcagtaaaaggggcgataaagctagttaccgca
ctaaaattaccaaacctggcagaacgctttagtaccatattggaggaaagaatgtcaaat
gaagcaatggggagcacagtcctccatggcaactttaaattcgatgctcctgtccaagcg
gatgacgtgtttcaaaggcctagtctgccagaaagcagcacagaaaaagctgttttacca
tttccaccccaaagatcatcaaccccttccttcccaaaagaggaaaaaaccgagcagcct
cctaatgctggaaatggcatagttgaaccaactcgagccttgagagtagggaagacagtg
gaagtgaagaatgcaggcgaagcgaaggatgttaaagaagcaataaatccagttaagaag
cagccagaagagattcctgtaagcttcaatcgtccatctaatccatttgctaaaaaatca
aacagacaagaacattcgtccttgtttgactccataaagaagatgaagacggatgcaaca
ggtaagaggtaa
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integrated database retrieval system