Coffea arabica (coffee): 113741833
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Entry
113741833 CDS
T11342
Name
(RefSeq) transcription factor E2FB-like
KO
K06620
transcription factor E2F3
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113741833
Transcription factors [BR:
carb03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
113741833
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GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
DivIVA
Rab11-FIP3
SKA1
XhlA
CC_Bre1
Mei5
CENP-F_leu_zip
TrmB
FlaC_arch
CC_Liprin_beta
Motif
Other DBs
NCBI-GeneID:
113741833
NCBI-ProteinID:
XP_071931472
UniProt:
A0ABM4WI52
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Position
1c:49842036..49848656
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AA seq
456 aa
AA seq
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MQQQQQQQQQQALKKQLPFTSMKPPFGDYHHFSTDPHRPPLEPEAVIVKSPPPAPPPLKR
KNDVVDVEVESNDQNHGFGYTDAANVSAKTPVSGKVGKAQKAPRMTKASRSGSQTPATNV
GSPSGNHLTPVGPCRYDSSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITN
VLEGIGLIEKKLKNRIQWKGLDVSRPGEVDESVASLQADIENLTMEEHRLDDQIREMQER
LRDLSEAENNQKWLFVTEEDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYR
IVLRSTMGPIDVYLVSQFEEKFEEINAVEAPPDIPSTSGVNENLATTSVTKESGGDNIQI
EEQEDNRMCSDIGTSQDFVSGIMKIVPDVDSDADYWLLSDADVSITDMWRTESGVDWGDL
SAIQENYAMPSVSTPRAQTPPPHTTEVPSATNVSGS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagcagcagcagcagcagcagcaggcgttgaagaagcagctgccattcacc
tcgatgaagccgccttttggtgactaccatcacttctccaccgaccctcatcggccgccc
cttgagccggaagctgttattgtcaagtcaccgccccctgcacctccgcctttaaaaagg
aagaatgatgtggtagatgttgaagttgagtctaatgatcagaaccatggttttggttat
accgatgctgccaatgtttcggcaaaaacacctgtatcgggaaaagttggaaaagcacaa
aaagctccaaggatgacaaaggcgagtagatctggttctcaaactcctgcgacaaatgtt
ggttctccttcgggcaatcatctcacgccagttggtccatgtcgctatgatagctccctt
ggtttgttgacaaagaagttcattaatctgattaaacatgctgaagatggcatccttgat
ctaaataaagctgctgacacattagaggtgcagaaaaggcgtatatatgacataacaaat
gtcctagaaggcattggactcattgaaaagaaactcaagaacaggattcagtggaagggt
ctagatgtatcaagacctggggaggttgatgagagtgttgctagcttgcaggcggatata
gaaaatctaacaatggaagagcacagattagatgaccaaataagagaaatgcaggaaagg
ttgagagacctgagtgaagctgagaataaccaaaaatggctattcgttactgaagaagac
attaagagtttaccttgcttccagaatgaaacgttaatagcaattaaagctcctcatggc
actaccttagaagttccagatcctgatgaggctgttgactatccccagaggagatacaga
atagttctcaggagtacaatgggaccgattgatgtttaccttgtcagtcaattcgaggaa
aaatttgaggagattaatgcagtcgaggcacctccagacattccttcaacgtcgggggtg
aatgagaatttagctacgacatcagtgaccaaggagagtggaggagacaacattcaaatc
gaagagcaggaagataataggatgtgctcagatataggcacatcacaagattttgtgagt
gggatcatgaaaattgttcctgatgttgatagtgatgcagattactggcttttgtcagat
gctgatgttagcatcacagacatgtggagaactgaatctggagttgattggggtgatttg
agcgcaattcaagagaattatgccatgcctagtgttagtaccccacgtgcacaaactcca
ccaccacatacaacagaagtgccttctgcaacaaatgtttcaggcagttaa
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