Coffea arabica (coffee): 113742022
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Entry
113742022 CDS
T11342
Name
(RefSeq) probable pectate lyase 9
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113742022
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113742022
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113742022
NCBI-ProteinID:
XP_027125503
UniProt:
A0A6P6XCK6
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Position
4e:1804412..1806292
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AA seq
353 aa
AA seq
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MNVIDKCWRTDRNWRSHRHQLATCSVGYAGKMMSNIGRDVINYKVTDPSDDALNPKPGTL
RYAMTHVKGKVWITFKRDMNITLQKPLLVSSFTAIDGRGVNVHISGGACLVLQRANNVII
HGLRIHNCVAQPAGPVLGPDAKIVHLGPVDGDAIRMLSSSKIWIDHNTLYDCPDGLIDVT
RGSTGVTISNNWFRSQNKVMLLGHDDGFRRDKDMKVTVAFNHFGPRCQQRMPRVRFGYAH
VVNNLYLGWGAYAIGGSMDPTIKSQANLFIAPKDGNKEVTWRQHNGNGMSWNFLSVEDVF
ENGASFSQSRSGGGVAVRPNYSAEQIFPIEAAREVRALTKSAGALKCPRVSRC
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgatcgacaaatgctggaggacagaccgtaactggcgcagccacaggcaccaa
ttggctacctgctccgttggttatgctgggaaaatgatgagcaacattggccgagacgtc
ataaactacaaggtgactgatccatccgacgatgcactcaaccctaagccaggaaccctg
agatatgctatgacccatgtcaagggaaaggtttggattacgtttaagagagacatgaat
attaccctccagaaaccccttcttgtcagcagcttcactgccattgatggacgaggtgtt
aatgtacacatttctggtggtgcttgcctagtgttgcaaagggcgaacaatgtcatcata
cacggtctccgcatccacaattgcgttgctcaaccagcaggacctgttctaggtccagac
gccaagattgtacatttgggacccgttgatggagatgctatcagaatgctatcgagttct
aagatatggattgatcacaatacgctttacgactgccctgatggattaattgatgttacg
cgaggctcaacaggtgttaccatctcaaacaattggtttagatcccagaataaggtcatg
cttttgggacatgacgatggcttccgacgagacaaggacatgaaagttaccgtagccttc
aatcattttggtcctcgctgccaacaaagaatgccaagagttcgattcggatatgcccac
gttgttaacaatctttacctgggttggggagcatacgctattggaggaagcatggatcct
acgataaagagccaagcaaatctcttcattgccccaaaagatgggaataaagaggtgaca
tggaggcagcacaacggaaatggcatgtcatggaacttcttatctgtggaagatgttttt
gaaaatggcgcctctttcagccaatcaagaagtggtggcggtgttgccgtgaggccaaac
tatagcgcggagcagatttttccaatagaagcagcaagagaagtgagggcattgaccaaa
tctgctggtgccttgaagtgtccaagggtatccagatgttga
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