Coffea arabica (coffee): 113742059
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Entry
113742059 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113742059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113742059
03012 Translation factors [BR:
carb03012
]
113742059
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113742059
Translation factors [BR:
carb03012
]
Eukaryotic type
Release factors
113742059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
113742059
NCBI-ProteinID:
XP_027125561
UniProt:
A0A6P6XF80
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Position
4c
Genome browser
AA seq
520 aa
AA seq
DB search
MDIEEEIKALQLDSSAEDIVTGNANGEEDAKPNDVVKPDEKDEGSKDVANANAPPPAGVE
LKGTSAVKEKETPAPEVVEDEVEESQKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRT
IQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETATTRFTILDAPGHKSY
VPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVSKLLVVVNKMDEP
TVNWSKERYDEIETKMLPFLRSSGYNVKKDVQFLPISGLVGSNMKTRIDKSICPWWNGPC
LFEALDAVEVPARDPKGPFRMPIIDKFKDMGTVVMGKVESGSIREGDNLLVMPNKAQVKV
VAIFCDEDKARRAGPGENLRVRISGVEEEEVSAGFVLSSVAKPIPAVSEFVAQLQILELL
DNAIFTAGYKAVLHIHAIVEECEIVELMQQIDPKTKKPMKKKPLFVKNGAVVVCRIQVNN
LMCVEKFSDFPQLGRFTLRTEGKTVAVGKVTSLPSIGDRA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaagaggagattaaggctctccaacttgactcctctgcagaagatattgtt
actggtaatgctaatggcgaagaagatgctaagccaaacgatgttgttaaacctgatgaa
aaagatgaaggttcgaaagatgtggcaaatgcaaatgctccccccccagctggtgttgag
ctgaaaggcacctcagcagtgaaagaaaaagaaacgcctgcacctgaagttgttgaagat
gaggtggaagagagccaaaagcgacatttgaatgttgtgtttattggtcatgttgatgct
ggcaagtcaactacagggggacagatattgtttttaagcggtcaagttgatgatcgaact
attcagaaatatgaaaaagaggcaaaggacaaaagcagagagagttggtatatggcttat
attatggatacaaatgaagaagagagggtcaagggaaaaacagttgaggttggacgtgca
cattttgaaacagcgacaactagatttacgattctggatgctccgggtcataaaagttat
gtccccaacatgattagtggagcatctcaagctgatataggagtgctggtaatatctgct
cgaaagggtgaatttgaaactggatatgagaaaggtggacagacgcgcgaacatgtccag
cttgcaaagactcttggagtctctaagctacttgttgttgtaaataaaatggatgagcct
accgttaactggtcaaaagaaagatatgatgagattgagacaaaaatgcttcctttcctg
agatcttcaggttataatgtcaagaaagatgtacagtttctcccgatttccgggcttgtg
ggttcaaatatgaagacaagaatagacaaaagtatatgcccttggtggaatggcccttgc
ctttttgaagctcttgatgctgttgaagttcctgcacgcgatcccaaaggtccatttaga
atgcctattattgacaaattcaaagacatgggaacggtggtaatgggcaaagttgaatct
ggtagcatccgtgaaggggataatttgttggtcatgccaaacaaggctcaggtgaaagtt
gttgccatcttctgtgatgaagataaagctaggcgtgctggacctggtgaaaatttgcgg
gtgaggatatcaggggttgaggaagaggaagtgtcagcagggtttgttttgagcagcgtt
gccaagccaatacctgctgtatctgagtttgtcgcgcagctacagattttggaattgctg
gataatgctatttttactgctggttacaaggctgtattgcatattcatgctattgttgag
gaatgtgaaattgttgaactaatgcagcagattgacccgaagacaaaaaagccaatgaag
aagaaacctctttttgtaaagaatggtgctgttgtcgtttgtcgtatccaggtgaataat
ttgatgtgtgttgagaaattctctgattttccacagcttggacgcttcactcttcgaact
gaagggaaaactgttgctgtgggaaaagttactagccttccatccataggcgatcgtgct
taa
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