KEGG   Coffea arabica (coffee): 113742116
Entry
113742116         CDS       T11342                                 
Name
(RefSeq) DNA repair protein RAD5A-like isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:carb03400]
    113742116
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    113742116
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 DEAD zf-RING_4 zf-ANAPC11 CCC_C_1st_pro
Other DBs
NCBI-GeneID: 113742116
NCBI-ProteinID: XP_027125632
UniProt: A0A6P6XHZ7
LinkDB
Position
1c:complement(51281737..51289606)
AA seq 1054 aa
MGISKVTDELVLMVRSIVGAEYSNMDIVRALHMAKNDPTAAINIIFDTPGFRKPEIPKKP
EPLNRNLSPEPATAANPSVNGTDDHDSKAKNQNLCRVSASNGAVKARIEDSERERKVEDA
RCSSSNGCSSSSSMGSEWWLVGCGEVAGISTCKGRTLKPGEEVFFTFPVERKSSSPSPGK
SGGGRGRQVSSSSEIVRFSTNACGEIGRIPYEWARCLLPLVRDKKVRIDGHCKSAPPVLG
IMDSIILSVSVYINSSMFQKSHQASLKAASNDESVIHPLPTLFQLLGLSPFQKAEFTPGD
LYTKKRPLNLEDSFNVSAPLLPIPKFKSQSTLDGSKMENEESISDNDLDKIVGVADSSEL
LEMGPPSTLQCELHPYQKQALHWMIQLERGHCLDEAASTLHPCWDAYRLADKRGLVIYLN
AFSGDATTEFPSTLRMARGGILADSMGLGKTIMTIALLLTHSERGGSLGNQLTAQTLTGN
GEASLISDQSPTAKKAAKISGFEKLLKPKNFLTCGGNLIICPMTLIGQWKAEIETHAQPG
TLSIYIHYGQNRSRDALVLGQSDVVLTTYGVLASEFSAENADVTGGLFSVRWFRVVLDEA
HTIKSSKSQISMAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLKVEPWGSWAWWNKLVQ
KPFEEGDARSLKLAQSILKPIMLRRTKSSTDKEGRPILVLPPADIQVIYCELTEAERDFY
DALFKRSKVKFDKFVEQGRILHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLT
RRFLKVGQDIVDGQARDVPSLAYVEEVVEELRKGEVGECPICLEAFEDAVLTPCAHRLCR
ECLLASWRSSTSGFCPVCRKMITKQELLTAPTQSRFRIDIERNWVESSKVSALLHELEIL
RLAGSKSIVFSQWTAFLDLLQIAFSRSDIQFLRLDGTLNQQQREKVIKQFSEEDNIMVLL
MSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRVHRIGQTEKVMIKRFIMKGTVEER
MEAVQARKQRMISGALTDQEVRSARIEELKMLFA
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgggtattagtaaagttaccgatgaattggttttgatggttcgatccatcgtaggcgct
gaatactcaaatatggatatagttcgagccctgcacatggccaagaatgatcccacggct
gcaattaacatcatttttgacactcccggttttagaaaacctgaaattcccaaaaaaccc
gagcctttgaatcgaaatttgagccccgagccggcaactgcggcaaatcccagtgtgaat
ggtactgacgatcatgatagcaaggccaagaatcagaatttgtgtcgggtttcggcttca
aatggggctgtaaaggctaggatagaggatagtgagagagagaggaaagttgaggatgcg
aggtgttcgagctccaatgggtgttcgagttcgagttcaatggggagtgagtggtggctc
gtggggtgtggtgaggttgcagggatttccacgtgtaaaggaaggactctgaagcctggg
gaggaggtttttttcacatttccggtggagagaaagtcgagttcaccttctcctggaaag
tctgggggtggtcgggggcggcaggtgtcttcttcttctgaaattgtcagattttccacg
aatgcttgtggagagattggccgcatcccatatgaatgggctcgatgcttattaccactt
gtgagggacaagaaagttagaattgatgggcattgtaaatccgctccacctgtattagga
attatggacagcattattctgtccgtcagcgtgtatataaacagttccatgttccaaaag
agccatcaggcttcactgaaagcagcctcaaatgatgaatcagttattcatcctctgcca
acgcttttccaattgctggggctctctccttttcagaaggcagaattcactccaggcgat
ttgtatacgaagaagcgtccattgaacttagaggacagctttaatgtctctgcaccattg
ttgcctattcctaaattcaagagccaatcaactctagatggaagtaagatggaaaatgag
gagtcaatatctgacaatgatcttgacaaaattgttggtgttgcagacagctctgaatta
ctggaaatgggacctccaagtactcttcagtgtgaacttcatccatatcagaagcaggct
cttcattggatgattcaacttgagaggggccattgcctggatgaagcagcatcaacgttg
cacccgtgttgggatgcataccggcttgcagacaaaagggggcttgttatatacttgaat
gcattttctggcgatgcaacaacagaatttccaagcactcttcggatggccagaggagga
attctggcagattctatggggcttgggaaaactatcatgaccatagctcttcttctaaca
cattctgaaagaggtggttcattaggaaaccaattgacagcccagactttgactggaaat
ggtgaagctagccttatttcagatcaatctccaacggcaaaaaaagcggcaaaaatttct
ggtttcgaaaagcttttgaagccaaaaaactttctcacatgtggtggaaaccttattatc
tgtccaatgacccttataggtcagtggaaggcagaaattgaaacccatgcacaacctggg
actttgtcgatttacattcactatgggcagaacagatcaagggatgctctcgttctaggc
caaagtgatgttgtgctcacaacttatggagttttagcctcagagttctcagcagagaat
gctgatgtcactgggggactcttctcagtgagatggtttagagtggtgctagacgaagca
cacacaataaagtcttcaaaaagccaaatttccatggctgcagctgcgcttgttgctgat
cgtcgatggtgccttactggcacccctatccagaacaacctagaagatctttacagtctt
cttcgatttttgaaggtggaaccatggggaagctgggcatggtggaacaaacttgttcag
aaaccttttgaggagggtgatgcgcgtagtttgaagttggcccaatcaatattaaagcca
attatgctaagaagaactaaatctagtactgacaaggaaggcaggccaattttagttctt
ccacctgctgatattcaagtgatatattgtgaacttacagaagcagagagggatttttat
gatgctttgtttaaaagatcaaaggtgaaatttgataaatttgtcgagcaaggacgtatt
cttcacaattatgcttcaatattggagttgctcttgcgtcttcgtcaatgttgtgaccat
ccatttttagtgatgagtcggggcgacacgcaagagttctctgatctgaataagctcaca
agacgctttcttaaggttggtcaggacattgtggatgggcaagctagagatgtaccatca
ctggcttatgttgaggaggttgttgaagagttacgaaaaggggaagtaggagagtgcccg
atatgccttgaagcttttgaagatgctgtattgacaccatgtgctcatagactatgcaga
gaatgcctcttagcaagttggcgaagctctacttctggtttttgtcctgtttgtagaaag
atgattaccaagcaagagcttctcacagctcctactcaaagtcgcttccggattgatatt
gagagaaattgggtcgaatcatctaaggtttctgcacttctgcatgaactcgaaattctt
cgcttagcagggtccaagagcattgttttcagccagtggactgcctttcttgatctattg
cagattgctttttctcggagtgatattcaatttcttcgtctggatgggacccttaaccag
caacaacgtgagaaagtaataaagcaattctcagaggaagataacatcatggttttgcta
atgtcattgaaggctgggggagttgggatcaacttaacagctgcatccaacgcttttgtc
ttggatccctggtggaacccagccgtagaggaacaagctgtaatgcgcgttcaccgcatt
ggacaaactgaaaaagtaatgatcaaaaggttcatcatgaagggaactgtagaagaaaga
atggaagcagtgcaagcacgcaaacaacggatgatttctggtgctttgactgaccaagaa
gttagatcagcacgcatcgaggagcttaagatgcttttcgcttaa

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