Coffea arabica (coffee): 113742154
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Entry
113742154 CDS
T11342
Name
(RefSeq) two-component response regulator-like APRR1
KO
K12127
pseudo-response regulator 1
Organism
carb Coffea arabica (coffee)
Pathway
carb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
113742154
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GFIT
Motif
Pfam:
Response_reg
CCT
Jas_motif
Motif
Other DBs
NCBI-GeneID:
113742154
NCBI-ProteinID:
XP_027125695
UniProt:
A0A6P6XD52
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Position
4e:complement(45175074..45181124)
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AA seq
550 aa
AA seq
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MEKGDIGKSGDGFIDRSKVRILLCDNDSKSSKEVFTLLCKCSYQVTSVRSPRQLIDALNA
EGPDIDIILSEVDLPMSKGLKLLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADY
LVKPLRTNELLNLWTHMWRRRRTLGLAEKNILNYDFDQVVSDPSDANTNSTTLFSDDTDD
KSRKSVNPEACASIHQEEEQNPSSADAPVETVIIVTSECLPDVPGMNDRRTGQIASFPKK
SELKIGESSAFFTYVKSSLPKSNCQDAAPLHENVCQHLTIEENLNAQGGHINTDSQVTIT
NDALQNRSNGEGCPSNDSIHDSFSVERSCTPPLSLEFLQQRNLNEFSQVPTHPRNEPHHD
VSGFHPHSAYPYYISGVMNQVIVPPSPMYQKNLPDVHSHSPMLPQYGHIPQCSPHVPGMA
SFPYYQVGICLQTGQMPTMHPWPSYGSSSSAEGNASKIDRREAALMKFRQKRKERCFDKK
IRYVNRKRLAERRPRVRGQFVRKVNGVTVDLNGQPASADDEDDEEEDEDEEDQVTNLDSS
PDDDALVCQR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggtgatatagggaagagtggagatgggtttatagataggagtaaagttagg
attttactatgtgataatgattccaagagctctaaggaggtttttacacttttgtgtaaa
tgttcttaccaagtgacttctgtgagatcacccagacaactgattgatgcactgaatgct
gaggggcctgatatagatatcattctttctgaagttgaccttcctatgtccaagggattg
aaacttttgaaatacattatgagggataaagaattgcgacgtataccagtcatcatgatg
tcagcgcaagacgaggtttctattgttgtcaagtgcttgaaatttggagcagctgactat
cttgtgaagccattgcgcactaatgaactattgaacttgtggactcacatgtggagaaga
aggcgaacacttggactagcggagaagaacatactgaattatgattttgaccaggtcgta
tcagaccctagtgatgctaacacaaacagtactactttattttctgatgacactgatgac
aaatcccgaaaaagtgttaatccagaagcatgtgcatcaatccatcaggaagaagagcaa
aatccttcaagtgcagatgctcctgtagagactgttattattgtcacatcagagtgtctc
cctgatgtgcctggaatgaatgatcgaaggacagggcaaattgcctcatttccaaagaag
agtgagctaaagattggcgaatcttctgccttctttacatacgtaaaatccagcttgcca
aaaagcaactgccaggatgctgccccattgcatgaaaatgtgtgtcagcatttgacaatt
gaagagaatcttaacgcacaaggtggccatatcaatactgattctcaagtaactattact
aatgatgctcttcagaaccgttccaatggagaaggttgtcctagtaatgacagcatccat
gattccttttctgtggaaaggtcctgtacaccacctttatcactggaattcttgcagcaa
aggaacttaaatgagttctctcaggtgcctacacatccaagaaatgagcctcaccatgat
gtttcagggtttcacccacacagtgcttatccatattatatttcaggagtaatgaatcaa
gttatagtgccaccttccccaatgtatcaaaagaacctaccagatgtacatagtcattca
ccgatgttacctcaatatggccatatcccgcagtgttctccccatgtgccagggatggca
tcttttccctactaccaagttggaatctgcctacaaacaggccaaatgcctacaatgcat
ccatggccatcatacggaagttcctcttctgctgaagggaatgcaagtaaaattgaccgt
cgggaggcagcattgatgaagttcaggcagaaaaggaaggaaaggtgctttgacaagaaa
atcaggtatgtcaatagaaagaggctcgcagaaaggagacctcgtgtacggggacaattt
gtaaggaaagtaaatggtgttactgtggatctcaatggacaaccagcttcagcagatgat
gaagatgatgaagaggaggatgaagatgaggaggaccaagtaactaacttggattcatca
cctgatgatgatgctttggtatgtcaacgatga
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