Coffea arabica (coffee): 113742187
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Entry
113742187 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase SPL2-like
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113742187
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113742187
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113742187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
AmpE
MASE1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113742187
NCBI-ProteinID:
XP_027125742
UniProt:
A0A6P6XIB4
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All DBs
Position
4e:1094292..1098416
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AA seq
396 aa
AA seq
DB search
MSVHDQAAAAVLSQLALAADGAVLGLGLAYVAVRSILKFTSNSSALRKIEQAPSIRVSDL
RSVLTLPSDNDDSANEQSESGKLVIVRGCVEAKSALDTNWKSLRPAPSGVLVSQESGDKG
VILLRTQTCIYNEWRGFFGWTSDLRSLFVRSWKEQESSTVRMVPFILVETGRWPQSDYVI
VNMEGSRHPLPLTTVYHRLQPIHASPYTFLQALFGHEYPVGLLDEEKLLPTGKEITAVGI
CSLKDGSPVIKSCKDLPFFLSDLTKDQILVDLDFKTKVLFWSGVVLGSLAVGILGYAVVR
NWNRWKEWRQQRRDQQQSSARSNQANDQGASDEEHGDVPDGELCVICLMRRRRSAFVPCG
HLVCCQSCALSVERDLSPKCPVCRQTIRNSVRIYDS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacacgaccaggcggcagctgcggtgctgtcgcagctcgctttggcggctgac
ggtgcggtgctaggattaggcctagcatacgttgcggtgcggagtattctcaaattcacc
tcgaattcctctgccctacgcaaaattgagcaggcaccttcaattcgcgtctccgatctc
cgctccgtcctcactttaccctcagataacgatgatagtgctaacgaacaatccgagagc
ggaaagctcgtgatcgtccgcggctgcgtcgaggcaaaatcggctcttgataccaactgg
aagagccttaggcccgcaccctccggtgtcctcgtctctcaggagtctggcgataaaggc
gttattttgctgcgaactcaaacgtgtatatacaatgagtggaggggattttttggatgg
acttctgacttacgctctttatttgttagatcatggaaagagcaagagtcatcgacagtt
agaatggtgccttttattcttgttgaaactggaaggtggcctcaatctgattatgtcatc
gtgaacatggaaggatcaagacatccactacctcttacaacagtttatcaccgcttgcag
cccatccatgcttctccttatacttttctccaggctctttttggccacgaatatcctgtt
ggtctgcttgatgaagagaaacttctcccaactggaaaggaaataactgcagttggcatt
tgcagtttgaaagatggaagtcctgtaattaaatcatgcaaggatcttccttttttcttg
tctgacttgactaaggatcagatactggtggatcttgacttcaagaccaaagttctattc
tggagtggggttgtgcttggttcactggcagttggtatccttggttatgctgtagtaagg
aactggaacagatggaaagagtggagacagcagagacgggaccagcaacaaagctccgct
cgtagcaatcaggcgaatgatcagggtgcatctgatgaggagcatggagatgttccagat
ggagaattgtgtgtgatatgcctaatgagaaggcggcgatctgcatttgtcccatgtgga
catcttgtctgttgccaaagctgtgctttatcagttgaacgtgatttatcaccgaagtgc
cctgtgtgtaggcagacaatccggaattcagtgaggatttacgactcatga
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