Coffea arabica (coffee): 113742205
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Entry
113742205 CDS
T11342
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
carb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113742205
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113742205
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113742205
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113742205
03036 Chromosome and associated proteins [BR:
carb03036
]
113742205
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113742205
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113742205
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113742205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_RIG_2nd
WDR55
Motif
Other DBs
NCBI-GeneID:
113742205
NCBI-ProteinID:
XP_027125776
UniProt:
A0A6P6XFT2
LinkDB
All DBs
Position
4e
Genome browser
AA seq
506 aa
AA seq
DB search
MTLSSISTPHTTEWKFSQVFGEPAPGEDVQQTDIISAIEFEKGGDYVAIGDHGGRVVIFE
KRTPKDDSLEYITRNELEQNDFMIRHPPNYQYKTEFQSHEPEFDYLKSLEIEEKIKKVRW
CMSPNGSLFILSTNDRTVKLWKVKESKVKKVKEMDLDPFVASENSLLAEKSFSSIPETTP
LSNGVEWADKTFNGAYSSVSHTKVPKFEDSPPARCRKAYAHAHDFNINSISNNSDGETFL
SADDFRVNLWNLEISDQCFNIIDMKPPNMEDLTEVITSAEFHPFHCNLLAYSSSRGYIRL
VDMRKSAICDQSSRILHDGASNGSKSFFTEIVASISDLKFASNGRHILSRDYMSLKLWDI
HMENSPVATYKIHEHLRPKLSDLYNNDAIFDKFACCLRGDGLQFATGSYSNQVHIFSHGG
GVEDITFEASKNPNRKPLMHANTRARRRSLSNLTRAFSRHGQENLNSENNEYYCNLNAKL
LHLAWHPNKDLIACAAGSSLFMHYLW
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgactttgagctcgatttcaactcctcataccactgaatggaagttctctcaggtcttt
ggggaaccagctccgggtgaagatgtccagcaaactgatatcatttctgcaattgagttc
gaaaaaggtggtgattatgttgctattggagatcatggtgggcgtgttgtaatttttgaa
aagaggacccctaaagatgattcacttgagtacattactcgaaatgagctagagcaaaat
gatttcatgataaggcaccctcccaactatcaatacaagactgagttccagagtcatgaa
ccagagtttgattacctgaagagcttggaaattgaagagaagatcaaaaaagtgagatgg
tgtatgtctcctaacggatcactattcattctttcaacaaatgataggactgtaaagcta
tggaaggtcaaggaaagtaaagtcaagaaagttaaagaaatggatcttgatccttttgtt
gcttcagaaaattcccttttggctgagaagagtttttctagcattccagaaacaacaccc
ctttctaatggtgtagaatgggcagacaaaactttcaatggcgcatattctagtgtcagc
cataccaaggtgccaaaatttgaagatagtccaccagcaagatgtagaaaggcatatgct
catgctcatgatttcaatatcaactctatctcaaacaatagtgatggtgagacatttcta
tctgcagatgacttcagggtaaacctgtggaaccttgagatcagtgatcagtgtttcaat
attattgacatgaagccacctaatatggaggatcttacagaggtaattacatcagcagaa
ttccatccatttcactgtaatctgctcgcttacagtagttcaaggggatatatccggcta
gtagacatgagaaagtcagcgatatgtgatcaaagttcaaggatattgcatgatggagca
tccaatgggtccaaatcattttttacagagatcgttgcatcaatatcagatttgaagttt
gcatctaatggaagacacatcttaagtcgtgattacatgagcctaaagctgtgggatata
catatggagaattctccagttgcaacatacaagattcatgagcatcttcggcccaagctg
tctgatctgtataacaacgacgccatatttgataaatttgcttgctgtctcagaggagat
ggacttcagtttgcaactggatcatatagcaaccaagtgcatattttttctcacggagga
ggtgtagaagatatcacatttgaagctagcaaaaatccaaataggaagccactcatgcac
gctaatacgagagctcgtagaagatctctgagtaatctgactcgtgcattttcccgacat
gggcaagaaaatctaaattcagaaaataacgagtactattgtaacttgaacgctaagttg
ctgcatctggcttggcatcccaacaaagatttgattgcttgtgctgctgggagcagtttg
tttatgcattatttgtggtaa
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