Coffea arabica (coffee): 113742367
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Entry
113742367 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113742367
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113742367
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GFIT
Other DBs
NCBI-GeneID:
113742367
NCBI-ProteinID:
XP_027126006
UniProt:
A0A6P6XGC5
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Position
4e:7575290..7585783
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AA seq
1166 aa
AA seq
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MERAGAGTTVPETTSLFPVRPQSSTGDEDNAPEWLRNTSFTTDLTVINDAVSTHYQQAQL
EELSSEEDEERAEKSKEKLARPQYELIDSSASDRGSYSDDEEMTEKRKNRKRKKKKRRRR
ELSSNAASLHEYGLASSSSSSRKPDIRAWASSTSDTTGSTKEYYFDSKGDRDNLAFGCIY
RMDVARYKLKNSRKFSDLSFYRRSQKSSVLDGDDDIDGLDGKLRLEGRYWSAMFAALERH
KNLKRIRVLAPQKIVPTVAAEFIPLSDDGGPNFRSSGDKVVEESWEDEVYRKTKEFNKLT
REKPHDEKVWLAFADFQDKVARMQPQKGARLQTLEKKISILEKATELNPDNEDLVLSLMK
AYQSRDSTDVLIGRWEKILVQNSGSHRLWKEFLQVFQGEFSRFKISEMRKMYANAVQALS
GACSKQYRQVQRHTTGPSSDPELVRLELGLVDIFLSLCHFEWQAGYHELATALFQAEIEY
TLFCPSLLLSEQSKRRLFEHFWNSNGARVGEDGALGWSTWLGKEEEQRQKIVNEELSHKA
EEGGWTGWSDPPSKTKDMMEALENDRVSDMAIEESGDVSDARDDEQDDDTEALLKKLGID
ASADANNEVKDTKTWTKWSEEELARDSDQWMPVRTRSAGAPHHDDAEADEQLLRVILYED
VTDYLFTLISEEARLSLVSQFVEFFGGRISQWACTNSSSWDGTTRSLDAFSYSILDNLRK
VHDILTEKQSIPMSMPLECLLSSSDDIFMRTSMMKFVRNASLLCLSALPQNYVLEEAVLV
AEELSNTRMNSLVSPVTPCRALAKSLLKNNRQDVLLCGVYARREAVSGNIDQARKIFDMA
LLSVGGLPLDVQSNASLLYLWYAEMEISNKSVDRSESSLRAVHILSCLGCGEKYTPYSRQ
ASSLQQLRARQGFKERIRMLGPLWARGRIDDFSTAVICSAALFEELTTGPAAAIEILDQA
FTMVLPERRRQSYQLEFLFNYYVKVLCKYHQEMRFSEIWDAIVKGLQMYPFSPYLYSALV
EISHLHTSPNKLRWILDDFCSKKPSIVAFFFSLLFEMSKGGLQHRIRAIFERALENAAFR
NVVVLWRCYIAYESVVAHDFSAARRVFFRAIHACPWSKKLWLDGFLRLNSVLTAKELSDL
QEVMRDKELNLRTDIYEILLQDEMEI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggcaggcgccggaaccaccgttcccgaaacgacgtcgctgttccccgttcgt
cctcaatcctccaccggcgacgaggataacgctccggaatggcttcggaacaccagcttc
accaccgacctcaccgtcataaacgacgccgtatccacccactatcagcaagctcaactc
gaagaattatcgtcggaagaagacgaagaaagggcagagaaaagtaaagaaaaattggcg
cgtccacaatatgagttgatagactcgtccgcttcggatcgtggctcgtacagtgatgac
gaagaaatgacagagaagaggaaaaatcggaagaggaagaagaagaagaggagaagaagg
gaattatctagtaatgcagcctcattgcatgaatacggactcgcatcctcttcttcttct
tctcgaaaacctgatattcgagcttgggcttcttctacttcagatactactggtagtact
aaagagtattactttgattctaagggcgaccgcgataatttggccttcggttgtatttac
aggatggatgtggctcgctacaagctcaaaaattcaagaaaattttctgatcttagcttc
tatagacggagccagaagagctcagtcttggatggagatgatgatattgatggactggat
ggtaaacttagattggagggtcgttattggtcagcaatgtttgctgcactagagcggcat
aagaacttgaagcgaattagggttcttgctcctcaaaagatcgttccaactgtagctgct
gaattcatccctttatcggatgatgggggtcccaatttcagatcttcaggggataaagta
gttgaggagtcatgggaagatgaggtttatcgtaaaaccaaggagtttaacaagttgaca
agagaaaagccgcatgatgagaaagtttggttagcttttgctgattttcaagacaaggtg
gccaggatgcagccacagaagggtgctcgtctgcagactcttgaaaagaagattagtata
ctggagaaggcaacagaactaaatccagataacgaagatttagttctttctcttatgaaa
gcttatcagagtagggatagcactgatgttctgattggtagatgggagaagatacttgtg
cagaattctgggagtcacaggttatggaaggagtttttgcaggtttttcagggtgaattc
tctagatttaagatatctgagatgaggaaaatgtatgccaatgcagtccaagctctatct
ggtgcatgtagcaagcagtataggcaggttcaacgacatactactggaccttcttctgat
ccagaacttgttcgtctagaacttggtttagttgatatatttcttagcctttgccatttt
gaatggcaggctgggtaccatgagttggctactgctttatttcaggcagagattgaatat
actttgttttgtccatctttacttcttagtgagcaaagtaagcgaagacttttcgagcat
ttttggaacagtaatggtgctagagttggggaagatggtgctctaggctggtcaacatgg
ctgggaaaagaggaagaacagaggcagaagattgttaacgaggagctatctcataaagct
gaagagggtggttggacaggttggtcagatccgccgtctaaaaccaaggatatgatggaa
gctctggaaaatgatagagttagtgacatggctattgaggaatctggtgatgtctctgat
gcaagagatgatgagcaggatgatgatactgaagctttgttgaaaaagcttggcattgat
gcttctgctgatgcaaataatgaggtcaaagacactaagacatggactaagtggtcagaa
gaagagttggcaagggactctgatcagtggatgcctgttcgcacaagatctgctggggct
cctcatcatgatgatgcagaagctgatgagcaactgttgagagtaattttatatgaagac
gtgacagattacctatttacgttgatttccgaggaagctcgtttgtctcttgtttctcag
ttcgttgaattctttggtggacgaatttctcaatgggcttgcactaatagttcaagttgg
gatgggactacacggagtttagatgctttttcgtattctatcctagacaacttgagaaaa
gtgcacgatattctgactgaaaagcaaagcattccaatgagtatgcctttggaatgtctt
ctaagcagctcggatgacattttcatgaggactagtatgatgaaatttgttcgaaatgct
tccttgctttgtttgagtgctcttccacaaaactacgttttggaggaagctgttcttgtt
gctgaagagctatcaaacacacgaatgaattcattggtgtctcccgttactccatgcaga
gctttggcaaagagccttttgaaaaataatcgacaggacgtgttgttatgtggtgtctat
gcacgaagggaggccgtctctggcaatattgaccaggcaagaaagattttcgacatggca
ttgctatctgttggagggcttccattggatgttcagtcaaatgcatctcttttgtatctg
tggtatgctgagatggagatttcaaataaatcagttgatagatcggaatcatcacttagg
gctgtgcacattctatcttgcttaggatgtggggaaaaatacactccatatagtaggcaa
gcttccagtttacaacagctgagagcacgacaagggttcaaagaacgaatacgaatgcta
ggtccactatgggcacgtggtagaatagatgatttttccactgctgtcatatgttcagct
gctctatttgaagaactgacaactggtccagctgctgctattgaaattctggatcaggca
ttcacaatggtgcttcctgaaaggaggcggcaaagttaccagcttgaatttttgttcaac
tattatgtgaaggttctttgcaaatatcaccaggaaatgaggttctcagagatatgggat
gctattgtgaaagggctgcagatgtatcctttcagtccttacctgtatagtgccttggtt
gaaattagccaccttcatacttccccaaataaattgcgctggattcttgatgatttctgt
agcaagaaaccatctatagttgctttcttcttctctttgttgtttgagatgagcaaaggt
ggcttgcagcatagaattcgtgcaatatttgagagggcattggaaaatgctgcatttcgc
aatgtggtggtactctggcggtgctacattgcctatgaaagtgttgtagcacatgatttc
tctgctgctagaagagttttctttcgagcaattcatgcttgtccatggtccaaaaaacta
tggctggatggtttcctcagactaaattctgttctgactgccaaggagctctcagacctg
caggaagtcatgcgggataaagaactcaatttgaggaccgacatctacgagatcctttta
caagatgagatggaaatatga
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