Coffea arabica (coffee): 113742556
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Entry
113742556 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
carb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113742556
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113742556
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113742556
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113742556
03036 Chromosome and associated proteins [BR:
carb03036
]
113742556
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113742556
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113742556
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113742556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPFR1_M
HEAT
PPP2R1A-like_HEAT
HEAT_2
PIK3R4-like_middle
RELCH_N
RELCH_C
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EF3_N
HEAT_EZ
PDS5
HEAT_GCN1_C
TPR_DNAAF5
HEAT_GCN1
Cnd1
Adaptin_N
HEAT_GCN1_C_2
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
113742556
NCBI-ProteinID:
XP_027126217
UniProt:
A0A6P6XJJ2
LinkDB
All DBs
Position
4e
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFVPYVGGVEHANVLLPPLEGLCSVEETCVRDKAVESLCRIGSQMREA
DLLEFFIPLVKRLAAGEWFTARVSSCGLFHIAYPSASETLRNELRTIYSQLCQDDMPMVR
RAAATNLGKFAATVEPAHLKTDIMSMFEDLTQDDQDSVRLLAVEDCAALGKHLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEATRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAVQHVLPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVFSIRDAAATNVKRLAEEFGPEWAMQHIIPQV
LDMINDPHYLYRMTILHAISLLAPVMGSEVTCSKLLPVIVETAKDRVPNIKFNVAKVLQS
LVPIVDQPVVEKTIRPCLVELSEDPDVDVRYFANQGLQAIEQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatcgacgagccattgtatccaattgcggtattaatcgacgaattgaagaac
gaagacattcagctccggttaaactcgatccgccgactctcgacgattgcgcgagccctc
ggagaggagaggacgcggaaagagttgattccgtttctcagcgagaataatgacgatgac
gacgaggtgttgctggccatggcggaagaattaggagtttttgtaccgtacgttggcggt
gtagagcatgctaatgtgttgcttccgcctctggaagggctttgtagcgttgaagagacg
tgtgtcagggataaagctgtggaatctttgtgtcgaattggatctcaaatgagggaagct
gatttgctcgagttttttattcctctcgtgaagagactagctgcgggtgagtggtttaca
gctcgagtttcttcttgtggattgttccatattgcttatccctcagcctcagagacattg
agaaatgaattaaggactatatacagtcagttgtgtcaagatgacatgcccatggtgagg
agagcagctgcaacaaatctaggaaagtttgctgctaccgttgaaccagctcatttgaag
actgacataatgtcaatgttcgaggatctgactcaagatgatcaagattctgtgcgatta
ttggctgttgaagattgtgcagctcttgggaagcacctggagcctcaagattgtgtggca
catattcttccggttatagttaatttctcacaggacaagtcttggcgagttcgttacatg
gttgccaaccaactctatgagctctgcgaagcagtggggccagaggccacaagaacggat
ttggttcctgcatatgttcggttacttcgtgacaatgaggctgaagttcgcatagctgct
gctggaaaagtaacaaaattctgccgaatattaagccctgagcttgcagttcagcatgtc
ttaccctgtgtgaaggaattatcttcagactcatcccagcatgttcgttctgctttggcc
tcagtcataatgggaatggctcctgttttaggaaaggatgcaactatagagcagcttctg
cctatatttctttcacttctgaaggatgagttccctgatgttcgactaaacattattagc
aagcttgatcaagtgaaccaggttattggaatagatctgctttcccagtccctcctaccg
gctattgttgagcttgccgaagatagacattggagagttcgacttgcaattatcgagtac
atacctttattggctagtcagttgggtgttggcttttttgatgataagcttggtgcactg
tgcatgcaatggttgaaagacaaggttttctcaattcgagatgcagcagcaactaatgtg
aagcgccttgctgaagaatttggtccagaatgggcaatgcagcacattattccacaggtt
ttggatatgattaatgacccacattacctttaccgaatgaccattcttcatgccatttcg
cttcttgctcctgtaatgggttctgaagttacatgctctaagctcctacctgtgattgtg
gaaacagcaaaggacagggttccaaatatcaagttcaatgttgcaaaggtgttgcagtct
cttgttccaatagttgatcagccggttgtagagaagacaatccgaccatgtctggttgag
ttaagtgaagacccagatgttgacgtgaggtatttcgccaaccaaggactacaggcaatc
gaacaggttatgatgtcgagttaa
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