Coffea arabica (coffee): 113742689
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Entry
113742689 CDS
T11342
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 6
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
113742689
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113742689
Enzymes [BR:
carb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113742689
Peptidases and inhibitors [BR:
carb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113742689
Ubiquitin system [BR:
carb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113742689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
113742689
NCBI-ProteinID:
XP_071901381
UniProt:
A0ABM4U258
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All DBs
Position
4c:complement(1740733..1748619)
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AA seq
480 aa
AA seq
DB search
MSTLTVSVKWQKKVFPAVEIDTAQSPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWP
KVGVKEGQRLMMMGTADEIIKAPEKGPLFAEDMPEEAQVVNVGHSAGLFNLGNTCYMNST
VQCLHSVPELKSALTNYPPSGAGNNVDQSSHQLTVATRDLFIELDKNAKPVAPMQFWMVL
RKKYPQFGQLNNGAFMQQDAEECWTQLLYTLSLSLKSSSSSEEPDTVKALFGIEFVSRVH
CTESGEESTERESVYSLKCHISQEVNHLHEGLKRGLKSELEKASPALGRSAIYVKDSRIN
DLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLVLDVFDLCSDDLRKRLETPRQILRDEE
GRKLGLKVDQKSSGSDTDVKMTDNEESANGNGGTSKDSSLEGKEVHLTGIYDLVAVLTHK
GRSADSGHYVAWAKQENGKWIQFDDDNPIPQREEDITRLSGGGDWHMAYICMYKARLVAM
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgttgacagtaagtgtaaagtggcagaagaaagtatttcctgctgtggaaatc
gacaccgctcagtccccgtatgtcttcaaatgccaattgtatgacctaactggagtacca
cctgaaaggcaaaagattatggtgaaaggtggtttactaaaggatgacgcagattggccg
aaagtaggagtaaaggagggccaaagattaatgatgatggggactgccgatgagataatc
aaggctccagaaaaaggtcctctttttgctgaggacatgccagaagaagctcaagttgtt
aatgtgggtcattctgctggcttatttaatcttggaaacacctgctacatgaactccaca
gtgcagtgcttgcattcagttccggagttaaagtctgctttaactaattatccaccatct
ggtgctggcaacaacgtggaccagtcttctcatcagttgacagttgctacacgagattta
tttattgagcttgataagaatgctaaaccagttgctccgatgcaattttggatggtattg
cggaagaagtatcctcaatttggccagctgaacaatggagccttcatgcagcaggatgct
gaagaatgctggacacaacttctatacacactttctctgtctctcaaatcatcaagttct
agtgaagagccggacactgtgaaggcactctttggtattgagtttgtaagcagggttcat
tgcacagaaagtggcgaagaaagtacagagagagagtcagtttattcacttaaatgccac
atttcacaagaggtgaaccatttgcatgagggcttaaaacgtggtttgaaatcagaactg
gaaaaggcttctcctgctttgggacgcagtgcaatttatgtaaaagactcacgcattaat
gacttgccgagatatttgactgttcaatttgtacgttttttctggaagagggaatcaaat
cagaaggcaaaaatcttgcggaaggtggactatccattggtgttagatgtttttgatttg
tgttcagatgatttaaggaagagattggaaactccccgtcaaattcttcgagacgaggaa
ggtagaaaacttggtctgaaggttgatcagaagagctctggttcagacactgatgtcaag
atgaccgacaatgaggaatcagcaaatggtaatggtggaacatctaaagattcatctctg
gaaggcaaagaagtgcatttaactggaatttatgacctggttgcggtgttgacgcacaaa
ggtagaagtgctgactcggggcattatgttgcatgggcgaagcaagaaaatgggaaatgg
atccagtttgatgatgataatccgattccccaacgcgaggaagatatcacaaggctttca
ggagggggtgactggcatatggcttatatttgcatgtacaaggcccgacttgtcgcaatg
taa
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