Coffea arabica (coffee): 113742763
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Entry
113742763 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113742763
04121 Ubiquitin system [BR:
carb04121
]
113742763
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113742763
Membrane trafficking [BR:
carb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113742763
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113742763
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
VPS18_RING_C
DZR
zf-RING_Vps41
Anti-TRAP
zf-RING_6
Zf_IFT144_1st
zf-Nse
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
113742763
NCBI-ProteinID:
XP_027126514
UniProt:
A0A6P6XH32
LinkDB
All DBs
Position
4e:complement(7056091..7059921)
Genome browser
AA seq
391 aa
AA seq
DB search
MSSAGIFGGGDRGGAGGGTAPQNYFCYQCQRTVTISPSPSPTSELVCPNCHGGFLEESES
ADEPPSPPAVGPDLFFPPIFGGGGGGGGGGGGFPVIFSSSSGGGGEIDLSALFGGAAGHP
AQSPNEFNPFAFLNNYLNNLRAGGANIQVVFDNPGGGVGIGFGGGGGLPGNFGDYFVGPG
LEQLIQQLAENDPNRYGTPPASKSAVEGLPTVKMTEELLASDSSQCAVCKDSFLLDEEAK
QMPCKHIYHSDCILPWLELHNSCPVCRYELPTDDPDYESRRNGQQGGNNSTSNVRSFGIN
IRTDDNLGTGSGGLSGGAVNQETPQTPRTVERRFRISLPWLFRGFGSPAETSGSGGAANS
DGGNNGSRQNNNNSGGSNTDSGGQARMEDLD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcgggaatatttggaggcggtgaccgcggaggagccggtggcggcacggca
ccgcaaaattacttctgctatcaatgccaacggacggtaactatctctccttcaccttct
ccgacctcggaactagtttgccctaattgtcatggcggatttctagaagaatccgaatcc
gccgacgagccaccatcgcctcccgccgtcggtcctgacctatttttccctcctatcttc
ggaggcggcggtggtggaggtgggggcggaggtgggtttccggttattttctccagctct
tccggcggtggtggagagattgacctatccgccctcttcggcggggccgcgggccaccct
gcccaatctccaaatgagtttaatcctttcgcctttctcaacaattatctcaataatctc
cgcgctggcggggcgaatatccaggttgtgtttgacaaccctggaggtggtgtcgggatt
ggcttcggcggcggcggaggacttcccgggaattttggggattattttgttggaccgggt
ctggagcagttgattcaacaattagcggagaatgatccgaatagatatgggaccccgcct
gcgtccaagtctgctgtggaaggattgcctaccgtaaaaatgacagaggagttgttggca
tcggattcttcacaatgtgcagtttgtaaggacagctttttgcttgatgaggaggcaaag
cagatgccttgtaagcatatataccattcggattgtatattaccgtggttggagttgcat
aactcttgcccggtttgtcggtatgagttgcctacagatgaccctgattatgaaagccga
agaaatgggcagcaaggtggaaataatagtactagcaatgttagaagttttggtattaat
attcgtactgatgataatttaggtacagggtctggtggtttaagtggtggtgcagtgaac
caggaaactccacagacaccgaggacggtagagaggaggtttaggatatcattgccatgg
ctgttcagagggtttggatcccctgcagagaccagcggaagtggaggagctgcaaatagt
gatggaggaaataatggttctcgtcagaacaataacaatagtggagggtcaaatacggat
tctggaggacaagctagaatggaggatcttgattga
DBGET
integrated database retrieval system
