Coffea arabica (coffee): 113742867
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Entry
113742867 CDS
T11342
Name
(RefSeq) exportin-T isoform X1
KO
K14288
exportin-T
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113742867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113742867
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113742867
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-T
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
113742867
NCBI-ProteinID:
XP_027126679
UniProt:
A0A6P6XHL3
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Position
4c:complement(1043504..1051227)
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AA seq
990 aa
AA seq
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MDDLEKAILISFDESGSVDSGLKSQAVAFCQQIKESPSLCSICIERLCFSKLVQVQFWCL
QCLHGALQVRYSSMSLEEKSFIRKSVFSMACYETIDDKNSVRVLEGPAFIKNKLAQVVVS
LIYFEYPLIWASVFIDYLPNLRKGPVVIDMFCRVLNALDDELISMDYPRSSDEVAVAGRI
KDAMRQQCIQQIVRVWYDILSMYKASDPDLCTSALDCIRRYVTWIDIGLIANDVFLQLLF
ELMLSNGLSDQVRGASASCVIAVVSKRMDPKSKLNLLQSLHMSRVFGLVATEDNDSDLVS
RVASLLTGYATEVLECSKRLNSEDGKGISVEILNEVMPSVFYVMQNCEVDATFSILQFLS
GYVGTMKNLSLLTNAQLLHVGQMLEVIRVHMCFDPVYRNNLDIWDKIGREEEDRMMEFRK
DLLVLLRSIGRVAPDVTQVFIRNSIADAVASPDERNVEEVEAALSLFLALGESLTDEMIR
TGSGLLRELVLMLLSTRFPCHSNRLVALVYLETITRYLKFVQENTQYIPLVLGAFLDERG
IHHPNINVGRRASYLFMRVVKLLKAKLLPYIETILQSLQDKVAQFTSMGFASTELSSCED
GSHIFEAIGLLIGMEEVPLGKQSDYLSALLTPLCHQVEEALLNAKVRNEEESPTKIAIIQ
QIIMAINALSKGFSERLVTASRPGIGAMFKQTLDVLLQILVVFPKIEPLRSKVTSFIHRM
VDTLGSSVFPYLPKALEQLLAESEPKELLGFMLLLNQLICKFNTAVGDIMDEVYPAIAGR
VFNILPREPLSLGPGGNNEEIRELQELQRTFYTLLHVIATHDLSSVFLSPKSRVYLDPMM
QLLLSTSCGHKDILVRKACVQIFIRLIKDWSARPYGEEKVPGFKKFVIEAFAINCCLYSV
LDKSFEFRDANTLTLFGEIVLAQKVMYEKFGNDFLVHFVSKGFPAAHCPQDLAQQYCQKL
QGNDIKALKSFYQTVIENLRVQQNGSLVFR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctcgagaaagcaatattaattagttttgacgaatctggaagcgttgattct
gggctaaaatcacaagctgttgctttttgtcagcaaattaaggagtccccctcactttgt
agcatatgtatagagcgtttgtgttttagtaaactagttcaagttcagttttggtgtttg
caatgcctgcacggtgcccttcaggttcgatactcatcaatgagccttgaagagaagtct
tttattcgaaagtcggtgttttccatggcttgttatgagactattgatgataagaactca
gttagggttttggagggtccagcatttattaagaataagcttgctcaggtagttgttagt
ctaatttatttcgagtaccccttgatttgggcttcagtatttatcgattatttgccaaat
cttcgtaaagggccagtggttattgatatgttttgtcgcgttttaaatgcactggatgat
gaattaattagtatggactatccgcgtagttcggatgaggtggctgttgcggggcgtatc
aaggatgccatgaggcagcagtgtatacagcagattgttagggtgtggtatgacatattg
tcaatgtacaaggcttcggatcctgacttgtgtactagcgctttagattgtattcggaga
tatgttacttggattgacatcgggctgatagcaaatgatgtctttcttcaattgttgttt
gaattaatgctgtctaatggattgtcggatcaagtccgtggagcttctgcctcttgtgtt
attgcagttgtttctaagcgtatggatccaaaatccaagcttaaccttttgcagagctta
cacatgagtagggtttttggtttggtagctacagaggataatgactctgatttggtttct
agagttgcttctttgctgaccgggtatgccactgaggtcttggaatgttctaagcggttg
aactctgaggatggtaagggcatctcagtggagattttaaatgaggttatgccttctgtt
ttctatgtaatgcagaattgtgaggtagatgcaactttcagcatcctgcagtttctttct
ggctatgttggcacaatgaagaacctatctttgctgacaaacgctcagcttcttcatgtg
ggtcagatgctggaagtaattcgtgttcatatgtgttttgatcctgtttatcgtaataat
cttgatatatgggacaaaattgggagggaagaggaagacaggatgatggaatttagaaaa
gatctacttgtgctgctgcgtagtataggacgtgtagcacctgatgtgactcaggttttt
attaggaactcaattgctgatgctgttgcatctcctgacgaaagaaatgttgaagaggta
gaagctgcactttcactgtttttggctctaggtgaatcattgactgatgagatgatcaga
actggaagtggtcttttgagagaactggtgctgatgcttttatctacaaggtttccttgc
cattctaatcggcttgtcgcccttgtgtatttggaaaccataactaggtatttgaagttt
gttcaggaaaatacacagtatatacctttggtgttgggtgcctttcttgatgaaagaggc
atacaccatccaaatataaatgtaggtcgcagggctagttaccttttcatgagggttgtg
aaattgctgaaagcaaaacttttgccctacatcgagacaatattgcagagtctgcaagac
aaagttgctcagtttacgagcatgggctttgcatccacagaactctcatcatgtgaagat
ggaagtcacatttttgaggcaatcggcttattaatcggaatggaagaagtaccattggga
aagcaatctgactatctttctgctttgctcactcctctttgtcaccaggtagaggaggct
ctcttgaatgctaaagttcgaaatgaagaagaatctccgacgaagattgcaattattcaa
cagataattatggccattaatgccctcagcaagggcttcagcgagcgtcttgtaactgct
agtcgccctgggattggcgcaatgttcaagcagactttggatgttcttctgcaaattctt
gttgtatttccaaaaatagagcccctgcggagcaaggttacatcattcattcatcgcatg
gtggacaccttaggatcatctgtattcccttatcttccaaaggctttggaacagttgctt
gctgaaagcgagccaaaagaacttttaggctttatgcttttgctgaatcagctcatatgc
aaattcaacactgcagttggggacataatggatgaagtttaccctgctattgctggtagg
gtgtttaatattcttccaagggagcccctttcattaggacctggtggaaataatgaggaa
atccgtgaattacaggagcttcagcgaacattttatacattgcttcacgtgattgctaca
catgatctatcatcagtgttcctttcccctaagagtagggtctatctggacccaatgatg
caattgctattatctacctcgtgtggccacaaggatatccttgtcagaaaggcatgtgtg
caaatatttatcagactaattaaagattggagtgccagaccatatggtgaagaaaaggta
cctggtttcaagaagtttgtaattgaggcatttgcaataaactgttgtttgtacagtgtg
cttgacaaatcctttgagttccgtgatgcaaatactcttactctttttggtgagatagta
ttggctcagaaggttatgtatgagaaatttggcaatgatttccttgtccattttgtatca
aaagggttcccagctgcccattgccctcaagatttggctcagcagtattgtcaaaagttg
cagggtaatgacatcaaggctctgaaatcattttaccagacagtgattgagaatttgaga
gtccaacagaatggcagcttggtctttagataa
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