KEGG   Coffea arabica (coffee): 113742867
Entry
113742867         CDS       T11342                                 
Name
(RefSeq) exportin-T isoform X1
  KO
K14288  exportin-T
Organism
carb  Coffea arabica (coffee)
Pathway
carb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113742867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:carb03016]
    113742867
Transfer RNA biogenesis [BR:carb03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    113742867
SSDB
Motif
Pfam: Exportin-T Xpo1 IBN_N
Other DBs
NCBI-GeneID: 113742867
NCBI-ProteinID: XP_027126679
UniProt: A0A6P6XHL3
LinkDB
Position
4c:complement(1043504..1051227)
AA seq 990 aa
MDDLEKAILISFDESGSVDSGLKSQAVAFCQQIKESPSLCSICIERLCFSKLVQVQFWCL
QCLHGALQVRYSSMSLEEKSFIRKSVFSMACYETIDDKNSVRVLEGPAFIKNKLAQVVVS
LIYFEYPLIWASVFIDYLPNLRKGPVVIDMFCRVLNALDDELISMDYPRSSDEVAVAGRI
KDAMRQQCIQQIVRVWYDILSMYKASDPDLCTSALDCIRRYVTWIDIGLIANDVFLQLLF
ELMLSNGLSDQVRGASASCVIAVVSKRMDPKSKLNLLQSLHMSRVFGLVATEDNDSDLVS
RVASLLTGYATEVLECSKRLNSEDGKGISVEILNEVMPSVFYVMQNCEVDATFSILQFLS
GYVGTMKNLSLLTNAQLLHVGQMLEVIRVHMCFDPVYRNNLDIWDKIGREEEDRMMEFRK
DLLVLLRSIGRVAPDVTQVFIRNSIADAVASPDERNVEEVEAALSLFLALGESLTDEMIR
TGSGLLRELVLMLLSTRFPCHSNRLVALVYLETITRYLKFVQENTQYIPLVLGAFLDERG
IHHPNINVGRRASYLFMRVVKLLKAKLLPYIETILQSLQDKVAQFTSMGFASTELSSCED
GSHIFEAIGLLIGMEEVPLGKQSDYLSALLTPLCHQVEEALLNAKVRNEEESPTKIAIIQ
QIIMAINALSKGFSERLVTASRPGIGAMFKQTLDVLLQILVVFPKIEPLRSKVTSFIHRM
VDTLGSSVFPYLPKALEQLLAESEPKELLGFMLLLNQLICKFNTAVGDIMDEVYPAIAGR
VFNILPREPLSLGPGGNNEEIRELQELQRTFYTLLHVIATHDLSSVFLSPKSRVYLDPMM
QLLLSTSCGHKDILVRKACVQIFIRLIKDWSARPYGEEKVPGFKKFVIEAFAINCCLYSV
LDKSFEFRDANTLTLFGEIVLAQKVMYEKFGNDFLVHFVSKGFPAAHCPQDLAQQYCQKL
QGNDIKALKSFYQTVIENLRVQQNGSLVFR
NT seq 2973 nt   +upstreamnt  +downstreamnt
atggatgatctcgagaaagcaatattaattagttttgacgaatctggaagcgttgattct
gggctaaaatcacaagctgttgctttttgtcagcaaattaaggagtccccctcactttgt
agcatatgtatagagcgtttgtgttttagtaaactagttcaagttcagttttggtgtttg
caatgcctgcacggtgcccttcaggttcgatactcatcaatgagccttgaagagaagtct
tttattcgaaagtcggtgttttccatggcttgttatgagactattgatgataagaactca
gttagggttttggagggtccagcatttattaagaataagcttgctcaggtagttgttagt
ctaatttatttcgagtaccccttgatttgggcttcagtatttatcgattatttgccaaat
cttcgtaaagggccagtggttattgatatgttttgtcgcgttttaaatgcactggatgat
gaattaattagtatggactatccgcgtagttcggatgaggtggctgttgcggggcgtatc
aaggatgccatgaggcagcagtgtatacagcagattgttagggtgtggtatgacatattg
tcaatgtacaaggcttcggatcctgacttgtgtactagcgctttagattgtattcggaga
tatgttacttggattgacatcgggctgatagcaaatgatgtctttcttcaattgttgttt
gaattaatgctgtctaatggattgtcggatcaagtccgtggagcttctgcctcttgtgtt
attgcagttgtttctaagcgtatggatccaaaatccaagcttaaccttttgcagagctta
cacatgagtagggtttttggtttggtagctacagaggataatgactctgatttggtttct
agagttgcttctttgctgaccgggtatgccactgaggtcttggaatgttctaagcggttg
aactctgaggatggtaagggcatctcagtggagattttaaatgaggttatgccttctgtt
ttctatgtaatgcagaattgtgaggtagatgcaactttcagcatcctgcagtttctttct
ggctatgttggcacaatgaagaacctatctttgctgacaaacgctcagcttcttcatgtg
ggtcagatgctggaagtaattcgtgttcatatgtgttttgatcctgtttatcgtaataat
cttgatatatgggacaaaattgggagggaagaggaagacaggatgatggaatttagaaaa
gatctacttgtgctgctgcgtagtataggacgtgtagcacctgatgtgactcaggttttt
attaggaactcaattgctgatgctgttgcatctcctgacgaaagaaatgttgaagaggta
gaagctgcactttcactgtttttggctctaggtgaatcattgactgatgagatgatcaga
actggaagtggtcttttgagagaactggtgctgatgcttttatctacaaggtttccttgc
cattctaatcggcttgtcgcccttgtgtatttggaaaccataactaggtatttgaagttt
gttcaggaaaatacacagtatatacctttggtgttgggtgcctttcttgatgaaagaggc
atacaccatccaaatataaatgtaggtcgcagggctagttaccttttcatgagggttgtg
aaattgctgaaagcaaaacttttgccctacatcgagacaatattgcagagtctgcaagac
aaagttgctcagtttacgagcatgggctttgcatccacagaactctcatcatgtgaagat
ggaagtcacatttttgaggcaatcggcttattaatcggaatggaagaagtaccattggga
aagcaatctgactatctttctgctttgctcactcctctttgtcaccaggtagaggaggct
ctcttgaatgctaaagttcgaaatgaagaagaatctccgacgaagattgcaattattcaa
cagataattatggccattaatgccctcagcaagggcttcagcgagcgtcttgtaactgct
agtcgccctgggattggcgcaatgttcaagcagactttggatgttcttctgcaaattctt
gttgtatttccaaaaatagagcccctgcggagcaaggttacatcattcattcatcgcatg
gtggacaccttaggatcatctgtattcccttatcttccaaaggctttggaacagttgctt
gctgaaagcgagccaaaagaacttttaggctttatgcttttgctgaatcagctcatatgc
aaattcaacactgcagttggggacataatggatgaagtttaccctgctattgctggtagg
gtgtttaatattcttccaagggagcccctttcattaggacctggtggaaataatgaggaa
atccgtgaattacaggagcttcagcgaacattttatacattgcttcacgtgattgctaca
catgatctatcatcagtgttcctttcccctaagagtagggtctatctggacccaatgatg
caattgctattatctacctcgtgtggccacaaggatatccttgtcagaaaggcatgtgtg
caaatatttatcagactaattaaagattggagtgccagaccatatggtgaagaaaaggta
cctggtttcaagaagtttgtaattgaggcatttgcaataaactgttgtttgtacagtgtg
cttgacaaatcctttgagttccgtgatgcaaatactcttactctttttggtgagatagta
ttggctcagaaggttatgtatgagaaatttggcaatgatttccttgtccattttgtatca
aaagggttcccagctgcccattgccctcaagatttggctcagcagtattgtcaaaagttg
cagggtaatgacatcaaggctctgaaatcattttaccagacagtgattgagaatttgaga
gtccaacagaatggcagcttggtctttagataa

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