Coffea arabica (coffee): 113743221 Help Entry 113743221         CDS       T11342                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism carb  Coffea arabica (coffee) Pathway carb03018   RNA degradation Brite KEGG Orthology (KO) [BR:carb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     113743221  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:carb03019]     113743221 Messenger RNA biogenesis [BR:carb03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      113743221   mRNA degradation factors    5'-3' decay     Decapping complex      113743221 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  113743221 NCBI-ProteinID:  XP_071905528 UniProt:  A0A6P6XGT7 LinkDB All DBs Position 5e Genome browser AA seq 822 aa AA seqDB search MDRFEGGDGIKESSNSQDLGQFGENPTGDALFDASQYAFFGNDAVEEVELGGLEDDEDEI PQVGLADEEYQLDREEGEVLGSFTEIDDLASTFSKLNKVVSGPRDAGAIGDMGSRESSSA AEWVQEEDFPSWADQNAFDTESTQDSKRWPSQPYPSSAYYLDSKSLYRTSSYPEQPQQYP QQQLNIHQHYSSEPILIPKSSFTSYPPPGGRSHQGSPNDQARQANIPYHPGGPQIPRSST NLSPFPNPQLQMTALPHGSPVGGNMPQFSPSGLPISSRLQNQWLTQTNMYPGDHSNLPNS MLQQHLPHQNGLLPPQLMSQQQLQQHRLQNPFQPAFGHLPGLPSQVLNHHLSSSPQMTSN FDMLGLADLRDPRIKSMVRGRQGMRYSPGFDINSQKSDNGWPVFKSKYMTADEIENILRM QLAATHSNDPYVDDYYHQACLAKKTASAKLKHHFCPNNLRDGPARARANNEPHAFLQVDA LGRVSFSSIRRPRPLLEVEPPNVSGTGTTEPKVCEKPLDQEPMLAARVTIEDGICLLLDV DDIDRFLQFNQLQDGGAQLTQRRQVLLEGLAASLQLVDPLGKNGNTVDRAPKDDLVFLRL VSLPKGRKLLSRYLQLLPPDDELVRVVCMAIFRHLRFLFGGLPADPGAAETTNDLAKMVA FSVHGMELKALAACLASVVCSAEHPPLRPIGSPAGDGASLILKSVLERATDLLRDPRASG NCSMPNRAFWQASFDAFFGLLTKYCFNKYDTIMQSFLSQTLPDMSNVSSDAAKGISKEMP VELLRASLPHTSEQQRKLLLDFAQQSVPVQGLSNQGGISGGP NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt atggatagatttgaaggtggggatggtattaaagagtcctccaattctcaggatcttgga caatttggtgaaaatccaacaggggatgcactatttgatgcatcacaatatgcattcttt ggcaatgatgcagtagaagaagtagaactcgggggtttagaagacgatgaagatgagatt cctcaagttggtcttgctgatgaagagtatcaactagatagagaagagggtgaagtactt ggatcttttactgaaattgatgatcttgctagcacattttcaaagttgaacaaagttgtc agtggcccacgagatgctggagctattggagatatgggatcaagagaaagttcatctgca gctgagtgggtgcaagaggaagattttcctagttgggctgatcagaatgcatttgataca gaaagtacacaggacagtaagaggtggccatcacagccatatccttcgtctgcttattat ctggattctaagagtctctacagaacatcttcgtatcctgagcaaccacagcagtaccca cagcagcagctaaatatacaccagcactactctagtgaaccaattcttataccaaaatct tctttcacttcatatcctcctcctggaggcagatctcaccaaggctctccaaatgaccaa gcacgacaggcaaatattccatatcatcctggtggacctcaaattccacgctcgtcaacc aatctttctccctttcctaatcctcagcttcagatgactgctttacctcatggttcacca gtgggtggaaacatgcctcagtttagtccttcaggtctgccgatcagtagccgcctgcaa aaccagtggttgactcaaacaaatatgtaccctggggaccattctaaccttccaaatagt atgttacaacaacatttacctcatcaaaatggactattgcccccccagttaatgtcacaa cagcaacttcaacaacacagattacagaaccctttccagccagcatttggccatttacct ggattgccatcccaagtactcaatcaccatctttcatcttcccctcagatgacaagtaat tttgatatgcttgggttggctgatttgagagatcctaggattaaatcaatggtaagaggt aggcaaggcatgcgctattcaccaggatttgacataaatagccagaagagtgacaatggg tggccagtgtttaaatccaaatacatgacagctgatgaaattgagaatattctgaggatg cagcttgctgctacacacagcaatgacccttatgtagatgattattaccatcaagcttgt ctagcaaaaaaaactgctagtgcaaagttaaagcaccatttttgcccgaataacctgagg gatggtcctgctcgggctcgcgctaataatgagccacatgcctttctccaggttgatgca cttgggagggtttccttttcttcaattcgcagaccccgtccactgctggaagttgaaccc ccaaatgtatctggtactggtaccactgaaccaaaggtgtgcgagaaacccctggaccag gaacctatgcttgcagctagggtgactattgaggatggcatttgtcttctacttgatgtt gatgatattgaccgttttctgcaatttaaccaactccaagatggtggagcacagttgact cagagacggcaagtactgctggaaggtctggcagcatcacttcagctggtggacccactg ggcaagaatggcaacacagtggatcgggctcctaaggatgatcttgtgttcctgaggttg gtctctcttcccaagggtcggaagctgttatcaaggtatcttcaacttcttcctccagat gatgaacttgttagagttgtctgcatggcaattttccgtcatttaaggtttttgtttggg ggcctccctgctgatcctggagctgctgaaactactaatgaccttgcaaaaatggttgca ttttctgttcatggaatggagcttaaagcacttgctgcatgtcttgcatctgtggtttgt tcagctgagcatcctcctcttcgtccaattggaagccctgcaggagatggggcttctctg attctgaaatctgttcttgagagggcaactgatcttcttcgagatcctcgtgcttctggc aactgcagcatgcccaatagagcattttggcaggcctcttttgatgcattttttggtctt ctcacaaagtattgcttcaataagtatgacaccattatgcaatcatttcttagtcagacc ctgccagacatgtctaatgttagttctgacgcagccaaaggcatcagtaaggaaatgccg gttgaactcttgcgagctagtcttcctcataccagtgagcaacaaagaaagctgctattg gattttgcacagcagtcggtgcctgttcaagggttaagtaatcagggtggcattagtggt ggcccttga

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