Coffea arabica (coffee): 113743436
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Entry
113743436 CDS
T11342
Name
(RefSeq) DNA topoisomerase 1 isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
113743436
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
113743436
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Topoisomerases
113743436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
113743436
NCBI-ProteinID:
XP_027127242
UniProt:
A0A6P6XMG8
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All DBs
Position
5e:complement(53297915..53306180)
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AA seq
926 aa
AA seq
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MAVEACSTPSLLEDSDEENAPLVFKRTSSSSKQNLSNSDTKKLSSQKRDGQSSRNSSDVC
PVNGQSSSAQTGRVVSSAKTPPAKSPLSSPKAANISAKTSLITSPGANSKPSSSTSATVK
QLENHKNSPVVKLPKPSVPAAKPSSTPVDSDDDKPLMAKLPSGSSRAIVNHGNKDGDGSS
LVQKPGVEEDEDSDDEKPLSSRYSSKSKLVESISKTRNPGEKKTLPAKVQQNGSALRDGP
VGKSSSLSNKRPPGEVKSSDESAVKKPKLSGPTAAINKKQAMLKAEPKVEDNDDDILISQ
TAKKTFASASKPKSNDDDDDHVPITQRMKKSTTSVSQSSSVKKVAKVVSSSLKKTNKKSK
KIIKKSKYSKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEE
VATMFAVMLDTDYMSKPQFKENFFSDWKKILGKNHTIQNLENCDFRPIYEWHQKEKEKKK
QMTTEEKKSLKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI
RPRDITINIGKDAPIPECPIRGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTL
KGQSDKEKYEKARLLKDYIHGIRTAYTKDFASKDPMKKQIAVATYLIDKLALRAGNEKDD
DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESGVFKAIQQFRSGKEGS
EDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRKTNGGDVLEKVVVYQQA
NKEVAIICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKP
KRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEV
PIEKIFNKSLLAKFAWSMDVDPSFRF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgaggcctgttcgacacctagtttgctggaagatagcgatgaggagaatgca
cccttagtattcaagagaaccagctcatcatcaaagcaaaatctatctaactcagataca
aagaaattgtcatctcagaagcgtgatggacaatcatctagaaacagttcagatgtatgt
cctgtgaatggccaaagttctagtgctcaaacaggtagggtagtttcctcagccaagaca
ccacctgccaaatcacctctttctagcccaaaagcagcaaatatctcagccaagacttca
ttgattacgtctcctggagcaaattcaaaaccatcttcttctacatctgctaccgtgaaa
cagctggaaaatcataaaaattcccctgtggttaagcttccaaagccttctgtacctgct
gctaaaccgagtagcacccctgtggattctgatgatgacaaaccattgatggctaagctt
cccagtgggtcatccagggcaattgttaaccatggtaataaagacggtgatggttccagt
ttggttcagaagccaggggtcgaagaagatgaagattcagatgacgaaaaacctctatca
tctaggtattcatcaaagtctaagttagttgaatctataagcaagacaagaaacccgggt
gaaaagaagacattaccagctaaagttcaacaaaatggttctgccttgagggatggtcct
gttggcaaatcttcttctctgtcaaataaaagacctcctggtgaggttaaatcttcagat
gagtctgcagtgaaaaagcctaagctttcaggtccaactgcagccatcaataagaagcag
gcaatgctcaaagcagaaccaaaggtggaggataatgatgatgatattcttatctcgcaa
acagccaagaagacgtttgcttcagccagtaagccaaagtctaacgatgacgatgacgat
catgttcctataacccagagaatgaagaagtcaactacttctgttagtcagtcgtcttct
gtgaaaaaagtagctaaagttgtttcatcttctctgaaaaaaacgaataagaagtctaag
aaaataattaaaaagtcaaagtactccaagtcatctaaagtgcctcctggctctggagaa
ggtcaaaagtggactactttggttcataatggtgtcatttttcctcctccctacaagcct
catggggttaagatgctgtacaagggccagcctgttactctgactcctgaacaggaggag
gttgctactatgtttgctgtgatgttagatactgattacatgagtaaacctcaattcaaa
gagaacttctttagtgactggaaaaagatactgggaaagaatcataccattcagaacttg
gaaaactgcgacttcagacctatatatgagtggcatcagaaagaaaaggagaaaaagaaa
cagatgactacagaagagaagaagtccttaaaagaagagaagcttaagcaagaagagaag
tatatgtgggccattgttgatggcgtcaaagagaaggttggcaacttcagggtggaacca
cctggattgtttcgaggtcgtggagagcatcccaagatgggaaagttgaaaaaacgcatt
cgtccaagagacattaccataaacatcggaaaggatgctccaattccagaatgtcccatc
cgtggtgaaagatggaaggaaataaggcatgacaacacagtgacctggttagcattttgg
aatgatccaattaatccaaaggaattcaaatatgtttttcttgcagccagcagcacctta
aaggggcaaagtgataaagaaaaatatgagaaggcaaggctgttaaaggactatattcat
ggcattagaactgcttatactaaggattttgccagtaaagatccaatgaagaagcaaata
gcagttgcaacttatcttatagataaactagccctcagggcaggcaatgagaaggatgat
gatgaagcagatacagttggttgctgcacactgaaagtagaaaatgtagaacccgtacct
ccaaatattttgaagtttgacttccttggtaaagattcaattagatatcagaatgaggtt
gaggttgaatctggagttttcaaggcaattcagcagtttcgaagtgggaaagagggtagt
gaagatctttttgacaagcttgacacaagtaaactgaatgctcatctgaaggaattaatg
cctggtcttactgcaaaagtttttcgtacatataatgcatctataacattagatgacatg
ttaagtaggaaaaccaatggtggagatgtccttgagaaagtagtcgtatatcaacaagca
aacaaggaggttgctattatttgtaatcatcagcgtactgtctcaaagacccacagtgca
caaatgtctcggctgaatgaaaagattgaggaactcaagggtgttctggaagaattgaaa
actgatttgtctagggccaaaaaggggaagccaccattaaagaatgctgatgggaagccg
aagaggaatttgaatccagaagcgcttgagagaaagatagctcaaactaatgctaaaatt
gagaagatggaacgggacaaggagaccaaagaggatctgaaaactgtagcattgggtacg
tcaaagatcaactaccttgatcccagaataacagttgcatggtgcaagcggcatgaagta
cctattgagaagatattcaacaagtcacttctggccaagtttgcttggtccatggatgtt
gatcctagcttcagattctga
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