Coffea arabica (coffee): 113743448
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Entry
113743448 CDS
T11342
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113743448
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113743448
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
113743448
NCBI-ProteinID:
XP_027127258
UniProt:
A0A6P6XHL6
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Position
5e:complement(47905152..47908356)
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AA seq
470 aa
AA seq
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MTEEVISSGFIQTPIGEANPPPLKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGK
GFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPSRALGDLTGIKKHF
CRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDAL
AEETARVTAASNVVAANSINYHFVGASLGPGMGQHFASMFKPISTNNETPANPIRQGLSL
WMGAHGLSQTQESIGNNNLQEIHHQLNPAVSSSGLVFTTDPFVSVPCSNPPPINYPLNWD
FGNKPSSNSSEELTNNSSSLPLSNVAKDGGSQVISVPSLFSTQHQSHQTHSTANMSATAL
LQKAAQMGATTTDPSFLGSFGLKCNDSQIQDGNRYCSPYGGTATSVATALQSSVTDHLST
LNELQMYPSKRRHIQVDQDSTPTTGGGQTRDFLGVGIQSICHPSSINGWI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggaagtaatctcaagtggtttcatccaaactccaatcggcgaagcgaatcct
cctcctctaaagaagaagagaaaccttccaggaacaccagatcctgaagctgaagttatt
gccttgtctccaaagactctgatggccaccaacagatttttatgtgagatatgtggaaaa
ggttttcagagggatcaaaacttgcaacttcatcgaagagggcataatttgccatggaaa
cttaagcaaagaactagtaaggaagttcgaaagcgagtttacgtatgccctgaaaagtcc
tgcgtccaccaccacccttctagggcacttggggacttaaccggtataaagaagcacttt
tgtagaaagcatggggagaagaagtggaagtgtgagaaatgctctaaacggtatgctgtg
cagtcagattggaaagcccactcaaagacttgtggcactagggaatacaaatgtgactgc
gggactattttttcaaggcgagatagctttatcacccatagggccttctgtgatgcctta
gcggaagaaacagcaagggtgactgcagcatccaatgttgtagcagccaatagcatcaat
tatcattttgtgggagcatcactagggcctggcatggggcaacattttgcttccatgttc
aaaccgatctcaaccaacaacgagacaccggcgaatccaataagacaaggtctttcactg
tggatgggggcccatggattatcccaaactcaagaatcaatcggcaataacaatcttcaa
gaaatccatcatcagcttaatccagctgtgagttcatcagggctagttttcaccactgat
ccatttgttagtgttccatgctctaatcctccaccaataaattatccactcaactgggat
tttggaaataaaccctcctccaacagttcagaagaattaacaaataatagttcatctctt
cctttaagcaatgttgctaaagatggtggaagtcaggtcattagtgtaccatctttgttc
agtacccaacatcaatctcatcaaacacattctactgcaaacatgtctgccacagcttta
ctgcagaaagctgcccaaatgggagctaccacaactgacccttcattccttggaagcttt
ggattgaagtgcaatgatagccaaattcaagatgggaacagatattgtagtccgtatggt
ggtactgcaacttcagtagctacagctctgcagagttcagtaactgatcatctctcaact
ttaaatgagttgcaaatgtacccctcaaagcgccgccacatacaggttgatcaagattca
acaccaactacaggaggaggtcaaactagggattttcttggagttgggatacagtccatt
tgccatccatcatccatcaatggatggatatga
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