KEGG   Coffea arabica (coffee): 113743448
Entry
113743448         CDS       T11342                                 
Name
(RefSeq) zinc finger protein MAGPIE-like
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:carb03000]
    113743448
Transcription factors [BR:carb03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    113743448
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_4 zf-C2H2_STOP2_C zf-C2H2_jaz zf-met zf-C2H2_6
Other DBs
NCBI-GeneID: 113743448
NCBI-ProteinID: XP_027127258
UniProt: A0A6P6XHL6
LinkDB
Position
5e:complement(47905152..47908356)
AA seq 470 aa
MTEEVISSGFIQTPIGEANPPPLKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGK
GFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPSRALGDLTGIKKHF
CRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDAL
AEETARVTAASNVVAANSINYHFVGASLGPGMGQHFASMFKPISTNNETPANPIRQGLSL
WMGAHGLSQTQESIGNNNLQEIHHQLNPAVSSSGLVFTTDPFVSVPCSNPPPINYPLNWD
FGNKPSSNSSEELTNNSSSLPLSNVAKDGGSQVISVPSLFSTQHQSHQTHSTANMSATAL
LQKAAQMGATTTDPSFLGSFGLKCNDSQIQDGNRYCSPYGGTATSVATALQSSVTDHLST
LNELQMYPSKRRHIQVDQDSTPTTGGGQTRDFLGVGIQSICHPSSINGWI
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgacagaggaagtaatctcaagtggtttcatccaaactccaatcggcgaagcgaatcct
cctcctctaaagaagaagagaaaccttccaggaacaccagatcctgaagctgaagttatt
gccttgtctccaaagactctgatggccaccaacagatttttatgtgagatatgtggaaaa
ggttttcagagggatcaaaacttgcaacttcatcgaagagggcataatttgccatggaaa
cttaagcaaagaactagtaaggaagttcgaaagcgagtttacgtatgccctgaaaagtcc
tgcgtccaccaccacccttctagggcacttggggacttaaccggtataaagaagcacttt
tgtagaaagcatggggagaagaagtggaagtgtgagaaatgctctaaacggtatgctgtg
cagtcagattggaaagcccactcaaagacttgtggcactagggaatacaaatgtgactgc
gggactattttttcaaggcgagatagctttatcacccatagggccttctgtgatgcctta
gcggaagaaacagcaagggtgactgcagcatccaatgttgtagcagccaatagcatcaat
tatcattttgtgggagcatcactagggcctggcatggggcaacattttgcttccatgttc
aaaccgatctcaaccaacaacgagacaccggcgaatccaataagacaaggtctttcactg
tggatgggggcccatggattatcccaaactcaagaatcaatcggcaataacaatcttcaa
gaaatccatcatcagcttaatccagctgtgagttcatcagggctagttttcaccactgat
ccatttgttagtgttccatgctctaatcctccaccaataaattatccactcaactgggat
tttggaaataaaccctcctccaacagttcagaagaattaacaaataatagttcatctctt
cctttaagcaatgttgctaaagatggtggaagtcaggtcattagtgtaccatctttgttc
agtacccaacatcaatctcatcaaacacattctactgcaaacatgtctgccacagcttta
ctgcagaaagctgcccaaatgggagctaccacaactgacccttcattccttggaagcttt
ggattgaagtgcaatgatagccaaattcaagatgggaacagatattgtagtccgtatggt
ggtactgcaacttcagtagctacagctctgcagagttcagtaactgatcatctctcaact
ttaaatgagttgcaaatgtacccctcaaagcgccgccacatacaggttgatcaagattca
acaccaactacaggaggaggtcaaactagggattttcttggagttgggatacagtccatt
tgccatccatcatccatcaatggatggatatga

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