Coffea arabica (coffee): 140003711
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Entry
140003711 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
carb Coffea arabica (coffee)
Pathway
carb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140003711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
140003711
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140003711
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
140003711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140003711
NCBI-ProteinID:
XP_071920468
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Position
9c:40497994..40503009
Genome browser
AA seq
197 aa
AA seq
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MKEDEKKELVTPGEVLGTASELKAGKGAYFSANDKTIYASLTGFRSIIPAPIDATDQRPT
VEVTGHKAHGAVPEPGSVVIARITKVMARMASADIMCVGPKSVREKFTGIIRQQDVRATE
IDKVEMHASFHPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESSAGGEMVPISWTEMQ
CPLTGQIERRKVAKVGA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacgagaagaaagagttggtaacgcccggggaagtgttggggacggcgtca
gagttaaaagcagggaaaggtgcctatttctcagccaatgataaaaccatttatgcctcc
ctcactggatttcgctctatcatccctgctccgattgacgccactgaccagagaccaact
gtggaagttactggccacaaagcccatggtgctgttcctgagcctgggtctgttgtcatt
gctaggataacaaaagtgatggctagaatggcttcagcagatatcatgtgtgttggtccc
aagtccgtaagagaaaaattcacaggcatcatcaggcagcaagatgtaagagcaactgag
attgacaaggttgaaatgcatgcttctttccacccgggtgacattgttagagcgctggtt
ctgtccctaggggatgcacgggcatattatttatctactgccaaaaatgaactcggtgtt
gtatctgctgaaagttcagcaggtggggaaatggttccaattagttggacggagatgcag
tgcccattgactggtcaaattgagcggagaaaagtcgcgaaggttggagcataa
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