Coffea arabica (coffee): 140003809
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Entry
140003809 CDS
T11342
Name
(RefSeq) transcription initiation factor TFIID subunit 8-like
KO
K14649
transcription initiation factor TFIID subunit 8
Organism
carb Coffea arabica (coffee)
Pathway
carb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140003809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
140003809
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140003809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
TAF8_C
TFIID-31kDa
Bromo_TP_like
Motif
Other DBs
NCBI-GeneID:
140003809
NCBI-ProteinID:
XP_071908288
UniProt:
A0ABM4ULY7
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All DBs
Position
6c:complement(4163005..4164903)
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AA seq
376 aa
AA seq
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MSDGGNEESAREIENVIEINPVISRSGANEFGRAIAKIAVAQICESVGFESFNESALESL
SDIAVRYLCDLGKTASSYANSAGRTACNVFDIIQGMEDFGLLRGVLGASEAHNCVIESGA
LREIMDYVECAEEIPFAQPVPQFPVVRARKLIPSFLQMGETPEFKQIPDWLPAFPDPHTY
RHSPVWNERVTDPRADKIELARQRRKAERSLLSLQQRLVCNGDVIASTSTTEPHDSKLEM
QPNASENPFLAKPLQAGEKDVSPVILPDTVRNQADGENHISLLEAFAPAIEAMKDGPSES
GHDVEKTLPDKRPAVCLEFKTGKKVLGDLLDLRLRNRGSGRTASWFGHNDEKDDKKRRAE
FILRQSMENQQELTQL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatggaggcaatgaggagagtgcgagagagatagagaatgtaattgagattaac
cctgttattagccgatcgggcgccaatgagttcggccgagcaattgcaaaaattgctgtg
gcgcagatatgtgaaagtgtgggatttgagagctttaacgagtcagctctcgaatctctt
tctgatattgcagttaggtatctttgtgacctagggaaaaccgcaagttcatatgctaat
tcagcaggcaggactgcgtgtaatgtgtttgatataattcaggggatggaagattttggg
ctgttgcgaggggttttgggtgcctcagaggctcataattgcgtcatagaatctggtgcc
ttgagggagatcatggactacgttgagtgtgctgaggagattccatttgctcagcctgtc
ccccaatttcctgttgtcagagctaggaaactgatacctagtttcttgcagatgggtgag
acaccagaattcaagcaaataccagattggctgcctgcatttcctgatccccacacatat
cgacactcgcctgtctggaatgagagggtgacggatcctcgtgctgataagattgagtta
gctaggcaaagacggaaggcagagagatctttattgagtttgcaacagaggttggtgtgt
aatggtgatgtgatagcttcgacctctaccacggaacctcatgatagcaagctggaaatg
caacctaatgcaagtgaaaacccatttcttgccaagcctttacaagctggagagaaagat
gtctctcctgtcattcttcctgatactgttaggaatcaagcagatggggaaaatcacatt
tctttgttggaggcatttgctccagctattgaggcaatgaaggatgggccttctgaatca
ggacatgatgtggaaaaaactcttccagacaaaagacctgcagtctgtttggagttcaaa
actgggaaaaaggttttaggtgatttgttggatctgagactcagaaacaggggttctgga
agaacagcatcttggtttggccataatgatgagaaagatgacaaaaaaaggagagctgag
tttatacttaggcagtctatggagaaccaacaggagctcactcagttgtaa
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integrated database retrieval system
