Coffea arabica (coffee): 140003952
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Entry
140003952 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
140003952
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
140003952
TFIIIC, fungi type
140003952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_8
TPR_2
TPR_14
TPR_1
TPR_17
TPR_11
TPR_16
TPR_9
TPR_12
ANAPC3
TPR_CcmH_CycH
NatA_aux_su
TPR-S
ARM_TT21_5th
TPR_15
HAT_PRP39_C
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
140003952
NCBI-ProteinID:
XP_071904742
UniProt:
A0ABM4UI18
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All DBs
Position
5e:complement(38806969..38813616)
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AA seq
945 aa
AA seq
DB search
MEEGEGAGVVGSSSEFHADEHPMELESQLEEEHEVDDEGEGTTANTMANIEGEEEDDDDE
DEEEEGYKFRFSDDMDPLAFTKEDASGLQPYEQFQRLEHDYEALAAKKRKARLQAIPQGE
VPAAKKPRQRQEDVSGATMEEIMELMNYGSRRRSRKSKRRGRRKGSRNKVSPEVTRKLGD
ATLHYAHGRYGEAIGMFYEVIRLSPNLPDPYHRLGLIYNEMGDKKRALDFYMIAAHLTPK
DASLWKLLVTWSVEQGDTGQARYCLSKAITADPEDINLRFHRASLYVELGDYLKAADSYE
QISQLCPDNVKVLQTAAQLYKKCGQSERAVTVLESYLRNCCKEPDLNVVDILASLHMEGN
AHHKALEHIEHAQQVYCSGKEMPLCLRTKAGICHIHLGNLVKAEALFNVLRHENLHDHPQ
LIIQIGDSLMNHGHYESAVEYYMMLVGDDVKNNGCLYLKIAECCCCLGKRLQSIDYFYRA
LDKLENSVDARLALSSLLLEENKDDEAISVLCPPKESESLFNLNLNAAKPWWLNGKIKLK
LSQIYKAKGLLEAFVDVFFPVVRETLFLETIQQKVRPRKKLSKSVLSERIKILDHVRTDT
VFHGFRPVASASDLSRASRAKKLLKKKEAKRAAALAAGIEWISDDSEDESPQQAPRELPL
PNLIRDAEHHHLIIELCKSLASLKKYWEALEIINLTLKLASNVLSVERNEELRTLGAQIA
YTIADPAHGFEYARYIVNQRPYSFSAWNCYYKVMSKLDSRYSKHNKFLHTMRTKHKSCVP
LTLIFGHQFTMISQHQAAVREYLEAYKLMPDIPLVNLCAGTALINLALGHRLQNKHQSVA
QGLAFLYNNLQLCRYSQEALYNIARAYHHVGLVSLAALNYEKVLTMHESDCPMPNLPNEK
PDGLASPKSGYCDLRREAAYNLHLIYKKSGAIDLARQILKDHCVI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcgagggtgctggggttgtaggtagcagcagtgagttccatgcagatgag
catcctatggaattggaatcacaattggaagaagaacatgaagtcgatgatgaaggagaa
ggcactactgctaacactatggctaatattgaaggagaagaagaagatgatgatgatgag
gatgaagaggaagaagggtataaattcaggttcagtgatgacatggatcctctggctttt
accaaagaggacgcatctgggctccagccttacgaacaattccagcgcctggagcacgac
tatgaagctttggctgccaaaaagcgcaaggcccgtctccaagccataccccaaggggaa
gtacctgcagctaaaaaaccacggcaacgacaagaggatgtttctggtgcaaccatggaa
gaaataatggaactcatgaattatggctctagaagaagatccaggaagtccaagagaaga
ggtcgacgaaagggatcaaggaataaagtcagtcctgaagtgactcgaaaacttggtgat
gctactcttcattatgcccatggccgctatggagaggccatagggatgttttatgaagtg
attcgtctttctcccaatcttcctgatccatatcataggcttgggctcatctataatgag
atgggtgataagaagagagccttggatttctacatgattgctgcccatttaaccccaaag
gatgcatctctgtggaagcttcttgtgacatggtccgtagaacaaggtgatacaggacaa
gccaggtactgcctttctaaagcaataacagcagatcctgaagatatcaatttgcggttt
caccgtgcatctctttatgttgagttgggtgattatttgaaagctgctgattcatatgag
caaatttcacagctctgtcccgacaatgtaaaggtactacagactgcggcccagctgtat
aaaaaatgtggccaatctgagcgtgcagtcactgtactggaaagctatctcagaaattgt
tgcaaggaacctgatttaaatgtggttgatatattggcttcactacacatggaaggcaat
gcacatcataaagccctcgagcatattgagcatgcacagcaggtttactgctctgggaaa
gagatgccattatgtctacgcacaaaagctggaatatgtcatattcaccttggaaacttg
gtaaaagcagaagctcttttcaatgttttgagacatgagaatttacatgatcatccccag
ttgattattcagattggagattcactaatgaatcacgggcattatgaatctgcagtagaa
tactatatgatgttggtaggagatgatgttaagaacaatggttgcctgtatctgaaaatt
gctgagtgttgctgttgtctggggaaacgattgcaatcaattgattacttctacagagct
ttagacaaacttgagaatagtgttgatgctcggctggctttgtcatcacttcttcttgaa
gaaaataaagatgatgaagccatttctgttctatgtcctcctaaagaatcagaatcacta
tttaacttgaacctaaatgcagcaaaaccatggtggcttaatgggaagataaagttgaag
ctttctcaaatctataaagctaaaggattgttagaggcatttgtagatgttttttttcct
gtggttcgcgagacattgtttcttgagactatacaacaaaaggtcaggccaaggaagaag
ctatcaaaaagtgttctttctgaacggataaaaatacttgatcatgttaggactgatact
gtgtttcatggatttagacctgtagcttcagcatcagatctgtctagagcgtccagagca
aaaaagttactaaaaaagaaggaagcaaaaagagctgctgctttggctgctggaattgag
tggataagtgatgattcagaggatgaatctccccaacaagcgccaagagagcttcctctt
ccaaaccttataagagatgcagaacatcatcatctcattatagaattatgcaaatcacta
gcatccttgaaaaagtattgggaagcattggaaatcatcaatttaactctgaaattggcc
tccaatgttttgtctgttgaaaggaacgaagagcttagaactctgggagcccaaatagca
tacactattgctgatcctgctcacggctttgaatatgcacgctatattgttaatcaacgt
ccttatagcttttctgcatggaactgctattacaaagtaatgtcaaaactggacagtcga
tattcaaagcataacaagtttttgcacaccatgcgaaccaagcacaaaagttgtgtacca
ctcactctcattttcgggcaccagtttaccatgatcagccagcatcaagcagctgttcgg
gaatatttggaagcttacaagctgatgccagatattcccttggtcaatctttgtgctgga
actgcattgataaacttggccctaggtcacagacttcaaaacaaacatcagtctgtggcc
caaggattggcatttctttacaataatttacagctttgcagatatagtcaggaagcactg
tataatatagctcgagcatatcatcatgtcggtcttgtttctcttgctgctttaaactat
gaaaaggttcttacaatgcatgaaagtgattgccccatgccaaaccttccaaatgagaaa
ccagatggtctggcttctccaaagtcaggctactgtgatcttcgtcgggaagcagcttac
aacttgcatctgatctacaagaaaagtggagcaattgatcttgccaggcaaatcttgaaa
gatcattgtgtcatatga
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