Coffea arabica (coffee): 140003961
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Entry
140003961 CDS
T11342
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03440
Homologous recombination
carb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140003961
03460 Fanconi anemia pathway
140003961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
140003961
03400 DNA repair and recombination proteins [BR:
carb03400
]
140003961
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
140003961
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
140003961
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
140003961
Bloom's syndrome complex (BTR)
140003961
FA (Fanconi anemia) pathway
140003961
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
140003961
NCBI-ProteinID:
XP_071911231
UniProt:
A0ABM4UVB9
LinkDB
All DBs
Position
6e
Genome browser
AA seq
726 aa
AA seq
DB search
MKKSPLPVQNICGPEKQKIGKEALVKLLRWHFGHSEFRGKQLEAIEAVLSGRDCFCLMPT
GGGKSLCYQIPALAKTGIVLVVSPLIALMENQVMALKAKGIAAEYLSSTQTAQVKSKIYE
DIESGKPSLRLLYVTPELIATSGFMSKLTKIHARALLNLIAIDEAHCISTWGHDFRPSYR
KLSSLRNRLPGIPLLALTATAVPKVQKDVMESLSLHNPLVLKSSFNRPNIYYEVRYKDLM
DDPYADLCNFLKSHGDICGIVYCLERTTCDDLASHLSKHGVTCAAYHAGLNSKLRSSILD
DWISAKTQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYY
GVDDRKRMEFILGTAKNNKSQSSSLQDDTSKKSLADFRQMVEYCENSGCRRKKILESFGE
QVPASLCGKTCDACKDPHLVSKYLGELTSACTFRNHSSRIFISSSANLHDEEQISEFWSR
DEEASGSEEDISDADENLDVDGPKNMFESRSVTNSSLNDRIELLQRAEESYYRNDLPDKQ
VHKIDKNNITEALREAGKQRLLNTMKQNQQKLDVLRIDYEESARTLENECHKKYGKSGKS
FYLSQLASTVRWISTANSEELVNRLNSSQSPGCSAMTAKSDCSLPSVSPSGGKSMVTDDE
KLHDSGVSETPLRALQHASEDTKLPPIPSFSDFINSRNPNDNKNLKSRKQPPSRDHKNPD
KRVRNQ
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcaccattaccagtgcaaaatatatgtgggcctgagaaacaaaaaattggc
aaggaagctttagtaaagctcctcaggtggcattttgggcattccgagtttcgtggaaag
caattggaagctattgaagcagtactctcaggaagggattgcttttgtcttatgccaact
ggtggagggaaatcgctgtgttatcaaattcccgccctggcaaaaaccggcattgtgctt
gttgtcagccctttgatagccctaatggaaaatcaagtaatggcattgaaagcgaaagga
atagctgcagaatatctttcttcaacccaaactgcacaagttaaaagcaagatttatgaa
gacattgagtctggaaaaccatccttaaggttgttgtatgtgacaccagaactgattgcg
acatcaggatttatgtcaaaattgactaagatccatgctagagcattgctgaatcttatt
gccattgatgaggcacattgcatttcgacatggggccatgacttcaggcccagctacagg
aagctttcttctttaaggaaccgactgcctggcatacccttgctggcgttgacagcaact
gctgtcccaaaagttcagaaggatgtcatggagtccttgtccttgcataacccattggtg
ctgaaatcatccttcaaccgtccaaatatttattatgaagttcgatacaaggaccttatg
gatgacccatatgctgacttatgtaatttccttaaatcacacggagatatctgtggaatt
gtttactgtcttgaacgtacaacttgtgatgacctggcttctcatctatcaaaacatgga
gttacttgtgcagcgtatcatgctggactgaacagtaaattgaggagctctatattggat
gattggatttcagcaaaaacacaggttgtcgtggcaactgtggcctttgggatgggtata
gatcgaaaggatgtcagaattgtttgccatttcaatattcccaagtccatggaggccttt
tatcaggagtcaggtagagcagggcgtgatcagttgccatcaagaagtcttttgtattat
ggagtggatgacaggaagagaatggaatttattctgggtactgctaagaacaataagtcg
cagtcctcaagcttgcaggatgatacctcaaagaaatccttggcagactttagacagatg
gttgaatattgcgaaaactctggttgccgtaggaagaagatccttgagagctttggagaa
caggtacctgcgtctttatgtggaaaaacctgtgatgcatgcaaggatcctcatttggtt
tccaagtatttgggggagcttacaagtgcttgcacttttagaaatcattcctccagaata
ttcatcagcagctctgcaaatctccatgatgaagaacagatttctgagttctggagtcgt
gatgaagaagcaagtggatcagaagaagatatatctgatgctgacgaaaatttagatgtt
gacggtccaaagaacatgttcgaatcaaggtcagttacaaattcaagcctgaatgatagg
attgaattgttgcaacgtgcagaagagagttattatcgaaatgacttgccggacaaacag
gttcacaagatcgataagaacaacataacagaagcattaagagaggctggcaagcaaaga
ttattaaatacaatgaagcaaaaccagcaaaagcttgatgttttacggattgattatgaa
gaatctgccaggacacttgaaaatgagtgtcacaagaagtatgggaagagtggcaaatct
ttttatttatctcaattagcaagtaccgtgagatggatctctacagcaaactcggaagaa
ttagtgaataggctcaacagcagccaaagtcctgggtgcagtgctatgactgcaaagtca
gattgctctttgccttcagtatctccatcaggtggcaagtcaatggttacagatgatgaa
aaattgcatgacagcggcgtatcagaaacccctttaagagcattgcaacatgcttctgaa
gacacgaagttgccaccaattccatctttctctgatttcatcaatagccgaaatccaaat
gataacaaaaatttgaaatcccgaaagcaacctcctagtagagatcacaagaatcctgat
aagagggtgagaaaccaatag
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