KEGG   Coffea arabica (coffee): 140003986
Entry
140003986         CDS       T11342                                 
Name
(RefSeq) WD repeat-containing protein 26 homolog
  KO
K22382  WD repeat-containing protein 26
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:carb04121]
    140003986
Ubiquitin system [BR:carb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     140003986
   CTLH complex
    140003986
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 LisH_WDR26 EIF3I Beta-prop_Aladin Beta-prop_IFT122_1st WD40_Gbeta ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_Vps41 eIF2A Beta-prop_DCAF4 Beta-prop_SCAP WDR54 Tricorn_2nd zf_topless TPR1-like_2nd
Other DBs
NCBI-GeneID: 140003986
NCBI-ProteinID: XP_071906532
UniProt: A0ABM4UGX4
LinkDB
Position
5c:complement(3201325..3214163)
AA seq 581 aa
MGGVEDDEPPSKRVRISSCKLEGLSNGTSLREPASGASCDLMARPLASEGDDEVVGPKGV
VRKVEFVRIIAEALYSLGYKKTGAHLEEESGIPLHSSAVNSFMQQVLEGKWDESVVTLHR
IGLVDESIIKLASFVILEQKFFELLDGENFMDALKTLRTEIAPLCVNSDRVRELSSCIVS
PSHCDLFRFSGKDTITVKPRSKLLEELQRLLPPTVMIPEKRLVHLVEQALDLQRDACKFH
NSLVEEMSLLTDHQCGRDHIPSQTLQILNEHSDEVWFLQFSHNGQYLASSSNDRTVIIWE
VKVDGRVSLKRKLAGHQKPVSFISWSPDDHQLLTCGVEEVVRRWDASTGECLHTYEKGGL
GVVSCSWAPDGRTVFTGLADKSLIMWDIDGKELECWKGQRTSKMSDLGITSDGKQIVSVC
KDTTILLFGWESKAEKIIEEDQTIISFALSRDGKSLLVSLLNEEIHLWNIEGHVRLLAKY
KGHKRSRFVIRSCFGGLEQAFVASGSEDSQVYIWHRSSGELVMTLPGHSGTVNCVSWNPS
NPHMLASASDDRTIRIWGLKEVKMKHNGAHTNGVHYCNGGS
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgggaggtgtagaggatgatgaaccaccttcaaaacgtgtgagaatatcctcttgtaaa
ttggaaggtctttcaaacggtacatctcttagagagcctgctagtggtgcatcgtgtgat
ttaatggctcggcccctagcatctgaaggggacgatgaagtcgttggtccaaaaggagtt
gttaggaaagttgaatttgttcgaatcattgctgaagcattgtattcacttggatacaag
aagacgggggcacatcttgaggaagagtctgggataccattgcattcatctgctgttaac
tcattcatgcaacaggttcttgaaggcaaatgggatgaaagtgtagttacattacataga
attggtctagtggatgaatctattattaagttggcatcttttgtaatcttggagcagaaa
ttttttgaacttctagatggagaaaatttcatggatgctttgaagacattgagaactgag
attgcacctctttgtgtaaacagtgatagagttcgtgagctttcttcgtgcattgtttct
ccatcacactgtgacctttttcgattttctggtaaagatactataacggtgaagcctagg
tcaaagttgttggaggaattgcaaagattgcttccaccaacagtaatgattcctgagaaa
agattggtgcatcttgttgaacaggctcttgacctacagcgggatgcttgcaagttccac
aactcgttggtcgaggaaatgtcacttcttactgaccaccagtgtggaagagaccatatt
ccttctcaaactttacagatactaaatgaacacagtgatgaagtgtggtttttgcagttt
tcccacaatgggcaatatttagcctcatcatctaatgatcgcacagttatcatatgggag
gtaaaagtggatggtcgagtctccttgaagcgtaagctagctggtcaccagaaacccgtg
tcctttatatcatggagccctgatgaccatcaactcctaacttgtggagtagaagaggtg
gttagacgatgggatgcttcgaccggtgaatgccttcatacctatgaaaaaggaggtctg
ggtgtggtgtcttgttcatgggctccagatggcagaacggtcttcactggactggctgac
aagagtcttattatgtgggatatagatgggaaggagctagagtgttggaaggggcagcgg
actagtaagatgtcagacttggggataacaagtgatgggaaacagattgtctctgtttgt
aaagatactacgattttattatttggatgggagtccaaggctgaaaaaataattgaagag
gatcaaactattatttcatttgcactatccagggatggtaaatccctactagttagtctt
ctgaatgaagaaattcatctgtggaatatagagggacatgtgaggctcttagccaaatac
aaaggtcacaagcgttctcgatttgtcataagatcctgttttggaggcctagagcaagca
tttgttgccagtgggagcgaggattcccaggtgtatatatggcatagaagctctggagag
ctagttatgacattgcctggacattctggcacggtgaactgtgttagctggaacccctcg
aatcctcatatgctggcatcagctagtgatgatcgcacaatacgcatatggggtttaaaa
gaggtaaaaatgaagcacaatggagcccatactaatggtgttcactactgtaatggtgga
agttga

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