Coffea arabica (coffee): 140004039
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Entry
140004039 CDS
T11342
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00520
Amino sugar and nucleotide sugar metabolism
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
140004039
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
carb01003
]
140004039
Enzymes [BR:
carb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
140004039
Glycosyltransferases [BR:
carb01003
]
Polysaccharide
Structural polysaccharide
140004039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF3752
Motif
Other DBs
NCBI-GeneID:
140004039
NCBI-ProteinID:
XP_071921955
UniProt:
A0ABM4VQZ6
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All DBs
Position
9e:complement(41059264..41064784)
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AA seq
675 aa
AA seq
DB search
MSASLLSIILFYFPVIVHALLVKAQASNLFTFDRESRHFSQLNDCPQCVDTGEQGRIESA
SQQEEKDIDIIVTCNDLSGSMKMWSVKSRDLSASWVWKDPGGVNGHTLSSKVLGDPLKLE
LLLNESDQHSGERRYHGSEIQHQLVSPLHPMKLKRRMLRQERRERRTAELIQQNKETDDK
MQEAAIERAREFDDTVKGKYSIWRKEYENPNSDSTLKLMRDQIIMARAYATIAKAKNEMV
LYDSLIKHSRESQFAIGEATSDVELQPSAFDRAKEMGHILSTAKDQLYDCITIARKLRAM
LQSAEGSLNGKKKKSAFLIQLAAKTVTRPMHCIPLLLTTDYYLHGYQDKDFPDKEKLEDP
SLYHYAIFSDNVLATSVVVNSTVLHAKEPEKHVFHIVTDKLNFAAMKMWFLVNPPAGAVI
QVENVDEFTWLNSSYCPVLRQLESAKMKDYYFKAHQASSITSGADQLKYRNPKYLSMLNH
LRFYLPEVYPKLDKILFLDDDIVVQKDLTPLWSVDLQGRVNGAVETCKESFHRFDKYLNF
SNPKISENFDPNACGWAFGMNVFDLKDWRKRNITGIYHHWQEMNEERTLWKLGTLPPGLI
TFYNLTYPLERSWHVLGLGYDPALNQTAIENAAVVHYNGNYKPWLDLAIAKYKSYWSAYV
MFDNPYLRLCNVDER
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatctctgctttccatcatcctattctacttcccggtcatcgtacatgctctc
ctagttaaagcacaagcttcaaacttgttcacatttgatagagagagcagacatttttcc
cagcttaatgattgcccgcagtgtgttgacacgggggaacaagggcgaatagaatctgct
agtcaacaggaggaaaaggatattgacataatagtgacatgtaatgacctttctggttct
atgaaaatgtggagtgtgaaatctagagacctgtctgcttcctgggtatggaaagaccct
ggtggtgtaaatggtcatactttaagttcaaaggtgttaggtgatcctctcaaacttgaa
cttttgttaaacgaaagtgatcaacattctggtgaaagacgttaccatggaagtgaaata
cagcatcagttagtatctccactgcatcctatgaagctcaagcggcggatgttacgtcaa
gaaaggagagaacgacggactgcagaactgatccaacaaaataaagagactgatgataaa
atgcaagaagctgccattgaacgagcaagagaatttgacgacactgtcaaaggtaaatac
agtatatggaggaaggagtatgaaaatcctaactctgactctacactgaaactaatgcgc
gatcagatcataatggcaagagcttatgcaaccatagcaaaggctaagaatgagatggtt
ttatatgattctctcatcaagcattctagagaaagtcaatttgcaattggagaggcaaca
tctgatgttgaacttcagccaagtgcttttgatagagcaaaagagatgggtcatatattg
tctacagcaaaggaccagctatatgattgtataacaatagcaaggaagttgagggccatg
ctccagtcagctgaagggagtctaaacggaaagaagaaaaaaagtgcatttcttatacag
ttagctgcaaaaacagtcaccagacctatgcattgcattccgttgcttctgacaacagac
tactacttgcatggttatcaggataaggacttccctgacaaagaaaagcttgaagatcct
tctttataccattatgctatcttttctgataatgtgcttgcgacatctgtggtcgtaaac
tcaacggtgctgcatgcaaaggagcctgaaaagcatgttttccatatagtaactgataaa
ttaaactttgcggcaatgaaaatgtggtttctagtcaatcctcctgctggcgcagtgatc
caagttgagaatgtagatgaatttacgtggctcaactcgtcttattgccctgttttacgt
cagcttgaatcagctaaaatgaaagattattacttcaaggcacatcaagcctcttctatc
acatctggtgcagatcaactcaagtacagaaatccaaaatacttgtccatgttaaatcac
cttcgattttaccttcccgaggtttacccgaagctggataagatattgtttctggatgat
gatattgtggttcagaaggatctaacaccactttggtctgttgatctgcaagggagggta
aatggcgctgtggagacttgcaaggagagctttcacagattcgacaaatacctgaacttc
tctaatccaaagatatctgagaatttcgatccaaacgcttgtggttgggcttttggtatg
aatgttttcgatttgaaggattggaggaagcgcaacattacgggaatatatcatcactgg
caggaaatgaatgaggagagaactctttggaaacttggaacgctgccgccggggctgatc
accttttataacttaacctatccccttgagaggagctggcatgtgttggggctggggtat
gatcctgccctcaaccaaacggcaatcgagaatgccgccgtggtgcattacaacggaaac
tacaagccatggttggatcttgccattgccaagtacaagtcttactggtctgcatatgta
atgtttgataatccttatcttcgcctttgcaatgtagacgagcggtga
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