Coffea arabica (coffee): 140004042
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Entry
140004042 CDS
T11342
Name
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
140004042
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
140004042
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
140004042
03029 Mitochondrial biogenesis [BR:
carb03029
]
140004042
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
140004042
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class I (A)
140004042
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
140004042
Prokaryotic type
140004042
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
140004042
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
140004042
NCBI-ProteinID:
XP_071905157
UniProt:
A0ABM4UD11
LinkDB
All DBs
Position
5e
Genome browser
AA seq
380 aa
AA seq
DB search
MDETAIPPSESVASLSVSSPPPPQTSSSQMSLEERFRIVRSVGEECIQEDELLNLLEKKP
QPVCYDGFEPSGRMHIAQGVMKAINVNKLTSAGCKVKIWIADWFAQLNNKMGGDLKKIKV
VGEYLIEIWKAVGMNLEGGQVEFLWSSDEINSRANEYWPLVMDIARRNKLPRIVRCCQIM
GRNEQDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIIL
SHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNLKIRKAYCPPQIAAGNPCLEYIKYII
LPWFNEFKVERSPQNGGDKIYKTFEELAVDYESGELHPGDVKPALAKSLNKILQPVRDHF
KNDANARELLRRVKSYKVTK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaactgccattcctccgtcggaatccgtggcgtctctctcggtttcctctccg
ccccctccccaaacctcctcctcacagatgagcttagaggagaggttcaggattgtcagg
agtgtgggggaagagtgtattcaagaggatgaactgttgaaccttttggagaagaagccc
cagcctgtttgctatgatggttttgagccatctggcagaatgcacatcgctcagggagtc
atgaaggcaatcaatgtgaacaaactgacttctgctggttgcaaggtcaaaatttggata
gcagactggtttgcccagttaaacaacaaaatgggtggtgatttgaaaaaaatcaaagtt
gttggtgaatacttaattgagatttggaaagctgtggggatgaatttggaaggcggtcag
gtagagtttttgtggtcctctgatgaaataaattccagagccaatgagtattggcccttg
gtaatggacatagcacggaggaacaagcttcccaggatagtcaggtgctgccagattatg
ggtcgtaatgagcaagatgaattgactgctgctcaaattttttacccttgcatgcagtgc
gcagacatattcttcctcaaggctgacatctgtcaattgggcatggatcagcgcaaagtg
aatgttctcgcaagggagtactgtgatgatattaagaggaaaaataaacctatcattttg
tcccatcacatgctgcctggcctacagcaggggcaggagaagatgtcaaagagtgaccca
tcttcttctatatacatggaggatgaagaggcggaggttaatctcaagataagaaaggca
tactgccctccacaaattgcagcagggaatccttgtcttgagtacataaaatatataatc
ttaccttggttcaatgagttcaaggttgagcgcagtcctcaaaatggtggtgacaagatc
tacaagacttttgaagaattagctgttgattatgaaagtggtgaactgcacccaggtgat
gtcaaacctgcgctagctaaatcgttgaacaaaatactccagcccgttcgtgaccatttt
aagaatgacgcaaacgctagagagctactgagaagggtgaagagttacaaggtcactaaa
tga
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