Coffea arabica (coffee): 140004083
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Entry
140004083 CDS
T11342
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
carb Coffea arabica (coffee)
Pathway
carb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
140004083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
140004083
04121 Ubiquitin system [BR:
carb04121
]
140004083
03029 Mitochondrial biogenesis [BR:
carb03029
]
140004083
Membrane trafficking [BR:
carb04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
140004083
Atg8 conjugation proteins
140004083
Ubiquitin system [BR:
carb04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
140004083
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
140004083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140004083
NCBI-ProteinID:
XP_071926478
LinkDB
All DBs
Position
11c:complement(42781858..42787002)
Genome browser
AA seq
708 aa
AA seq
DB search
MVVDAEEGTLLKFAPFQSRVDEGFWHRLSSLKLNKLRLDESPMPITGFFAPCSHKQVPSR
LTLLAESLPSEDQKQSSSLPATLNQGNRNRCPVPGILYNTNTLEGFNAIDRVSLLETEAK
KIWDDIHNGKVEESSSVLLRFMVISFAELKKWSFCYWFAFPALMLDPAARVVSLRSASQC
LSLEQAESLSSACNEWRNTSSTTGVPFFLVCIASDSHVTLRHLADWEACMDDGQKVLFGF
YDPCNVPYPGWPLRNYLAYICIRWGLEKVHFLCYRETRGFADLGFSLIGEASISVSPEWK
TRDCTPKAVGWEVNKGNAKPNFISLAKAMDPTSLAISSADLNLKLMKWRAVPDLNLSILS
ATRCLILGAGTLGCEVARLLMAWGFRKITMLDSGKVAISNPLRQSLYTLDDCGEFKAIAA
VRSLNRIFPAVEAEGIVMAIPMPGHPVPEQEEQSVLEDCKRLHDLVECHDVIFLLTDTRE
SRWLPTLLCSSANKIAITAALGFESFVVMRHGAGPLSMIKDSGALSSLSAEMHNLSLTNR
MGKQRLGCYFCNDVVAPVDSTANRTLDQQCTVALPGLASITSGYAVKLLAGILQDRLGIF
ADAEFANSANNPSSENCLGILPHQIRGSLSQMSMITLVGHASSSCTGCSSTVILEYQKRG
LDFVLQAINTPMYLEDRTGLTELKKSADSFNLDWEVGTDDAEDDCVEI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttgacgctgaggaaggaactttgcttaaatttgcaccgtttcaaagtagagtg
gatgagggtttctggcatagattgtcttcattgaagctcaacaaattacggcttgatgaa
tctccaatgcccattactggtttttttgcaccttgttcgcacaagcaagttccaagtcgt
ctgacccttctggccgagtctttgcctagtgaagatcaaaaacaatcatcatccttacct
gctactttgaatcaggggaataggaatagatgtcctgtacctggcattctttacaatacg
aacactttggagggcttcaatgccattgatagagtgagcttacttgagactgaagctaag
aagatttgggatgatattcacaatggtaaagtggaggagagcagctctgtgctcttaaga
ttcatggttatatcatttgcagagctgaaaaaatggagcttttgttattggtttgctttc
cctgctctaatgcttgatcctgcagcaagggtggtcagtttgcggtcagcatcccagtgc
cttagtttagaacaggctgagtccttgtcatcagcatgtaatgagtggcgtaatacaagc
tctacaacaggtgtgccattttttctggtttgtattgcttcagactctcatgttactctt
agacatctagctgattgggaagcttgcatggatgatggtcaaaaggttttatttggtttt
tatgacccttgtaatgttccatatcctggttggccacttcgaaattatcttgcatatatt
tgcataagatggggtcttgagaaggttcatttcttgtgctatcgcgagactcgtggtttt
gcagatttagggttttcactcattggagaagcttctatatcagtttcaccagaatggaaa
actcgtgactgtacgcctaaagctgttggatgggaagtgaacaaagggaatgctaaacca
aacttcatcagccttgcaaaggctatggatccaactagtttagccatatcaagtgcagat
ttgaatttaaagcttatgaaatggcgtgcagtgccagatttgaacctcagcatcttgtct
gctactagatgtcttatactgggagcaggtacacttggatgcgaagttgctagattgctt
atggcttggggtttccgtaaaattacaatgcttgatagcggcaaggttgccatttcaaat
ccactgaggcagtccctgtacacattagatgactgcggtgaatttaaggccattgctgca
gttagaagtttaaatcgcatctttcctgcagtggaagcagaaggcattgtgatggctatt
ccaatgcctgggcatccggtgcccgaacaagaagagcaaagtgtgcttgaggattgtaaa
cggctgcacgatttagttgaatgtcatgatgtaatattcttgctgactgatacgcgagag
agtcggtggctgcctactcttctttgctctagtgctaacaagatagctattacagcagct
ctaggatttgagagctttgtagttatgcgtcatggagctggtcctttgagcatgatcaaa
gattctggagctctaagtagtttgtctgctgaaatgcacaacctctcacttacaaacagg
atgggaaaacagagactaggatgctatttctgtaatgacgtggttgcgccagttgactcg
actgcaaaccgtaccttggatcagcagtgcacagttgctcttcctggacttgcttctatt
acatctggctatgctgttaaacttctagcaggaattttacaagatcgtttggggatattt
gcggatgctgagtttgcaaactcagctaataacccgagcagtgagaattgtcttggtatc
ttgccccatcagattcgaggatccctctcccagatgtctatgataacacttgtggggcat
gcctcttctagctgcactggttgtagcagcactgtgatattggaatatcagaagagaggg
ctggattttgtccttcaagctatcaatacacctatgtatctagaagatcgaacaggacta
acagagctgaaaaagtcagctgattcttttaatttggattgggaagttggaactgatgat
gcggaggatgattgtgtggaaatataa
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