Coffea arabica (coffee): 140004154
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Entry
140004154 CDS
T11342
Name
(RefSeq) nuclear pore complex protein NUP54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140004154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
140004154
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140004154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
140004154
NCBI-ProteinID:
XP_027095826
UniProt:
A0ABM4WCS0
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MFGTPSSAPPFGTPSSTPAFGTPSSTPAFGTPSSTPAFATPSSSPAFGTPSTPSFGTGFG
TSLFSTPFSQQQSQQNSFFQTPQSSSPFGLSTPFAATQVQSSPFGQPAVTPALPFGNVQL
TTQMAPVAPLPFSLADRDIQAIVDAYKEEPGNPKYAFKHLLFSVTEPQYRVKPAGVSDIM
WAEAMGKLEGMESSDRERLWPHLVQGFKDLSQRLKLQDEVIVSDSERLRITQSNVKMLQR
HFQADTFPWIRRMQQKEQSLQRRLLRVMRIIEALEGKGCRSPLMKGEAELAEKLAALTRQ
LKGSGAELSRRVQNLLTLSRVEANGLGGRSMYIPGSTKIHEQSLLDMQEVLQQQTEAIAR
LGNVLKRDMRDMEIIMAEETEMSED
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcaccccatcatcagccccgcccttcgggactccctcctcaacccctgcattc
ggtaccccctcttcgaccccggccttcggcactccgtcttccacccctgccttcgccact
ccatcttcaagcccagccttcggaacgccgtccaccccgtcgtttggcaccggcttcgga
acctcactgttctctactccgttctcgcagcagcaatcgcagcagaactctttctttcag
acgcctcagagctcaagccctttcggtctctcgacgccgttcgctgccacccaagtgcag
tcttctccgtttggtcagcccgctgtgactccggcattgccctttggaaatgttcaattg
accactcagatggctccagttgctcctctccccttttctcttgccgatcgtgatattcaa
gctattgttgatgcttacaaggaggagcctgggaaccctaagtatgcatttaagcattta
ttgttcagcgtgactgaacctcaatatagggtgaaacctgctggtgtatcagatataatg
tgggcagaggccatggggaaacttgaaggcatggagagttctgatcgagaacgactttgg
ccccaccttgttcagggatttaaagatctgtcacagcgcctcaagctacaagatgaagtt
atagtctcagattctgagagattgcgaataacacagagcaatgtaaaaatgcttcaaagg
catttccaagcagacacttttccttggattcggaggatgcaacaaaaggagcagagtctc
cagaggcgcctcttaagggtaatgcgaattatagaggcattggaaggcaaagggtgtcga
tcacctttgatgaagggagaagctgaattggcggagaagttggctgcattaactcgacag
ttaaaaggatccggagcagaactttctagaagggttcaaaatctactgactctatctcgt
gttgaagccaatggccttggtggtagatctatgtatatacctggatcaactaaaatacat
gagcaaagtcttttggacatgcaggaggtcttgcaacagcagacggaggctattgctagg
cttggcaatgttttaaagagagatatgagggatatggagatcatcatggctgaggaaaca
gagatgtcagaagactag
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