Coffea arabica (coffee): 140004176
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Entry
140004176 CDS
T11342
Name
(RefSeq) proteasome activator subunit 4-like isoform X1
KO
K06699
proteasome activator subunit 4
Organism
carb Coffea arabica (coffee)
Pathway
carb03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
140004176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
carb03051
]
140004176
Proteasome [BR:
carb03051
]
Eukaryotic proteasome
Regulatory particles
PA200
140004176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_PSME4_mid
PSME4_C
Questin_oxidase
HEAT_PSME4
CLASP_N
Motif
Other DBs
NCBI-GeneID:
140004176
NCBI-ProteinID:
XP_071907628
UniProt:
A0ABM4UK18
LinkDB
All DBs
Position
5c:complement(48708233..48724555)
Genome browser
AA seq
1820 aa
AA seq
DB search
MHLYNAWLPPAVAEETKKEKESFHKVLKAVKESYKVDDPESVYATLKWVSVIDLFIKAKS
ELLMEDVTAVVETGLELFQISENKLHVQVRWGNLLVKILNKYRKKLSLKVQWRPLYDTLI
HTHFKRNTGPEGWRVRQRHFSTVTSLVRSSRRFFPPGSAFEIWSEFRSLLENPWHNSSFE
GSGFVRLFLPTNLDNQDFFSQEWMNLCLDHWDSVPNSQFWNSQWASVTARVIKNYKFIDW
EKFLPTLFNRYLNMFEVPVANGSGSNPFSVDVSRNTRFLFSNRTVTPSKAIAKSIVYLLK
PDGAAQKYFEKLVNLLEQYYHPSNGGRWTYSLERFLAYLVHIFHKRLLHEQMSSRDDGKK
SELFLQQPDRLSFINALLKLIDRGQYSKNENLSDTVAAATSVLSYLEPSLVLPFLASRFH
MALETMTATHQLKSAVTSVAYAGRSLFLTTLSCSPFKQDDFGGTDSFSDLLMIALSNALF
GLDANDPPKTLATMQLIGSLFSNMALLEDSTNELSPLPEFQFSEWLDEFLIRLFSLLRHL
EPSGVLNEGVHSSTTSGTILVEDGPYYFCMLEIVLGRLSRALYKQALNKISKFVKSNILP
GAIAEVGLLCCACVNSNPEEAVLHIVEPILLSVISSLRETPVMGYGGRRTSVAIGRSKCF
FQEKATLSPALETNIEYQLKILSVAISYGGPALLRYKDEFKEVIFSAFDSTSWKVNGAGD
HVLRSLLGSLIHYYPIDQYKCLLRHSAAASLEEWISTKDFSNAVPPVGPKWHIPCDDEVE
FANELLKLHFDCALDDLQKICQSKIHCDPGNEKEHLKVTLLRIDSSLQGILSCLPDFRPS
VGNGMVEDSGLFSFLIAGATGSLVGSTELREKAAEIIHAACKYLLEEKSDDSILLLLVIR
IMDALGNYGSSEYEEWSSHRQAWKLESAAIIEPPINFIVSSHSKGKRRPRWALIDKAYMH
STWRSSQSSYHLFRTSGNISPSDHVLILLDDLLNLCLHSYETVRTLAGKSLLKMLKRWPS
TISSCVYALSENLKAPSSPEYAVLGSCAVLSTQTVLKRLTSDAKALCCFLRGILSSSHHE
SLKSQKAITELFVKYNIYFEGIPRSILRTSGIHSDATDFSDLVSEIGSMSFESTNLHWRY
NLMANRVLLLLSMASANDPHSSTNILKETSGHFLKNLKSQLPQTRILAISALNTLLKESP
YKVSAGNPVFIGDVQGNTKSSLEGALSIIFQEEGFFNETLSSLSHVHIIADADSASSRGH
HGNSSFQSLADKSITHFYFDFSASWPRTPNWISLLGSDTFYSNFARIFKRLTQECGMPVL
LALRDALIEFVNSQERSKQCVAAEAFAGVLHSDVAGVSEAWDSWMMTQLQNVIYSQSVES
VPEWAACIRYAVTGKGKYGTRVPLLRQRVMDCLMTPLSQTVTSSVVAKRYTFLSAAFIEI
SPQRMLRGETELHFTLLKELVRNMSHSSAQVRESIGVTLCVLCSNIRLHESCSPSNSLEG
VRGDVYGNFEGGSWDEYIVQRASELAVNIHNISACDILETSSDKTLHNGISKDHSRDDVN
WMETVFHFVISSLKSGRSSVLLDVIAGLLHPIISLQETSNKDLSTLAKAAFELLKWRVFH
GTRTQKAISLILSLGSDSNWRTRSATLTFLRTFMYRHTFILSNVDERQIWHTVEKLLADN
QIEVREHAAAVLAGLMKGGDADLAEDFRNRAFREANVILKKRRQRNLRSGLSVASIHGPV
LALAACVLSIPYDMPSWLPEHVTLLAHFVSEPSPVKSTVTKAVAEFRRTHADTWNIQKDA
FSEEQLEVLADTSSSSSYFA
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtacaatgcttggttgccgccggcggtggcggaggagacgaagaaggagaaa
gaatcattccacaaagtgttgaaggccgtgaaggaatcgtataaagtggatgatcctgaa
tctgtttacgccactcttaaatgggtctccgttattgacctgtttataaaggcgaaaagt
gaacttttaatggaagatgtgacagctgttgtggaaactgggttggaactgttccaaata
tcagagaacaaacttcacgtgcaggttagatggggaaatctcttggtaaaaatattgaac
aaatatcgaaagaagttgtccttgaaagttcagtggcgccctctgtatgataccctgatc
catacgcatttcaagaggaacactggcccagaagggtggagagtgagacaacgacatttt
tcgacagttacttctcttgttcgatcctctaggagattcttccctccaggctctgccttt
gagatatggtctgaatttagatctttattggaaaacccatggcataactcttcttttgaa
ggttctgggtttgttcggctgttccttccaacaaacttggacaatcaggacttcttttca
caagaatggatgaatttatgtttagaccactgggattctgtaccaaatagtcagttctgg
aacagccaatgggcatccgttacagctcgcgtaataaagaattataagtttattgactgg
gagaagtttttacctactcttttcaatagatacttgaatatgtttgaggttcctgtagct
aatgggagtggctcaaatccgttttctgtggatgtttcaagaaataccagattcttgttt
tcaaatagaacagttactccatcaaaggctattgctaaatcaattgtttatctattgaaa
cctgatggtgcagcacaaaaatactttgagaaattggtcaacctcttggaacaatattat
catccttctaatggcggtcgttggacttattcactggagcgctttttggcttacttggtt
cacatatttcacaaacgtttgctacatgagcaaatgagcagcagggatgatggcaagaaa
agtgaactcttcctccagcagcctgaccgactttcttttataaatgcattgctgaagctg
attgatcgtggtcaatatagcaagaatgagaatctatctgatacagttgctgcagcaacc
tctgttttgtcatacctggaaccttcacttgttctaccatttttagcatctcgcttccac
atggctttggagactatgacagctacacaccagttgaagagtgctgtgacatctgtggct
tatgcagggcgatcgctgtttctcactaccctgtcatgttcacctttcaaacaagatgat
tttggtggcaccgattctttcagtgatcttctgatgattgctttgtccaatgccttattt
ggtttagatgccaatgatccaccaaaaaccttggcaaccatgcaactgattggttctttg
ttctccaatatggctttgctggaagatagtacaaatgaattatcacccttaccagaattt
cagttttccgagtggcttgatgagttcttgattcgtcttttttctttgcttcggcacttg
gaaccaagcggtgttctgaatgaaggagttcattcatcaacaacttcaggaacaattctt
gttgaggatggtccttactacttctgcatgttagaaattgtcctagggaggctttcaaga
gcactttataaacaggctttaaacaaaatttccaagtttgttaaatcaaatattcttcct
ggggcaattgctgaagtaggactactatgttgtgcctgtgtcaattcaaatccagaagag
gcagttcttcatatcgttgagccaattctactgtctgttatatcttccttgagagagaca
cctgttatgggttatggagggagaagaacttctgtagccattggacgaagcaagtgtttc
ttccaggaaaaagccacactttctccagctcttgaaacaaatattgagtatcaattgaaa
atattatcagttgcgatcagctatggaggtcctgcacttcttcgctacaaggatgagttt
aaggaagtgattttttctgcgtttgattcaacatcttggaaggtaaatggtgctggtgat
cacgttctcagatctcttcttggaagcttgattcattactatcctattgaccaatacaag
tgtcttttgcgtcattctgctgctgcatcattagaggaatggattagcacaaaagatttt
tcaaatgctgtaccacctgtcggtccaaagtggcatatcccttgtgatgatgaagttgaa
tttgcgaatgaactcttgaagttgcactttgactgtgctttagatgaccttcagaagata
tgccaatctaagatccactgtgatccaggaaatgagaaagagcatttgaaagtgactctt
ttgcgtattgattcatcattacaaggcattttgtcatgcttgcccgatttcagaccgtct
gttgggaatgggatggtagaagattctggtcttttttctttcttaattgctggagcaaca
ggttcacttgttggcagcacagaattgcgagaaaaggctgctgagattatccatgctgct
tgcaaatacctgttggaggaaaaatctgatgatagcattctcttgctgcttgtcattcgt
ataatggatgctttaggaaattatggaagttctgaatatgaggagtggtcgagtcaccgg
caggcttggaaactggaatctgctgccataatagaacctccgatcaatttcattgtctca
tctcattctaaaggaaaaagaaggcctagatgggctcttatcgacaaagcatatatgcac
agcacttggagatcatcacagtcatcataccatctgtttcggacgagtggcaacatatct
ccatctgatcatgtgcttatcttgctggatgatcttcttaatctgtgtttacacagctat
gaaacagtccggacacttgctgggaaatctcttctgaaaatgctgaaaagatggccttct
acaatctcgagctgtgtgtatgctctgagtgaaaatttaaaggctccgagttcaccagaa
tatgctgtcttgggctcttgtgcagtcctttcaacccaaactgttctcaagcgtttgaca
tcggatgcaaaggccctctgttgttttcttcgtggaattctttcaagctctcatcatgaa
tcactaaaatctcagaaagcaattactgagctctttgtcaagtacaacatctattttgaa
ggtatacctagaagcattttaaggacatcagggattcattcggatgcaactgatttctca
gatttggtttctgagattggttccatgagttttgaaagtacaaatttgcattggaggtat
aatctgatggctaacagagtgctgctacttttgtctatggcatctgcaaatgatccacat
tcatctacaaatattcttaaggaaacttctggtcatttcttaaagaatttgaagagtcaa
cttccacagacgagaattctagctatctctgccttaaatactctgttaaaagaatcacct
tacaaagtctctgctggaaaccctgttttcattggggatgtacagggaaacaccaaatct
tcgcttgaaggagctttgagtattatatttcaagaagaggggttcttcaatgagactctg
agtagtctttctcatgtgcatataattgctgatgcagatagtgcatcctcccgaggacat
cacggaaattcttccttccagagcttggcagacaaatcaatcacacacttctattttgac
ttctctgcttcatggcctcgtactcctaactggatatctttgctaggaagtgatactttt
tattcaaattttgctagaatcttcaaacgtctaacccaagaatgtggcatgcctgttttg
ctggcacttagagatgcattgatagagtttgttaattcccaggagaggtctaagcaatgt
gttgcagctgaggcatttgctggagtcttgcattctgatgttgctggtgtttcagaagca
tgggacagctggatgatgacccaattacaaaatgttatttattcccaatcggtggaatct
gttccagagtgggctgcttgtattcgttatgcagttactggcaagggaaaatatggtact
agggtacctcttctgagacaaagagtcatggattgtctaatgactccattgagccagaca
gttacttcttcagtagttgccaagcgctacacttttctttcagctgcatttatagaaata
tccccacaaaggatgctaagaggtgaaacagagcttcattttacgctattgaaggagttg
gtgcgtaatatgagtcattcatcagctcaagtgagagaatcaattggagttaccctatgt
gtgttatgctcaaatattcggcttcatgaatcctgttctcctagtaactctcttgaaggg
gtaaggggtgatgtatatggaaattttgaaggtggaagttgggatgaatatattgtgcaa
cgagcttcagaacttgcagtgaatatccacaacattagtgcttgtgacatattggaaacc
tcctcagacaaaaccttacacaatggaatatcaaaagaccattctagagatgatgttaat
tggatggaaacggtattccatttcgtcatctcttctctgaagtctggaagatcttcagtt
ttgctggatgttattgcgggcctactgcaccccatcatctccttgcaggaaacatcaaat
aaagatttgtcaactctagccaaagcagcttttgaattgctaaaatggagggttttccat
ggaacaagaacccagaaagccatctctcttattctttctttaggaagtgactccaactgg
cgaactagatctgcaactttgacgtttttgaggacttttatgtacaggcacactttcatc
ctctcaaatgtggatgagaggcaaatatggcatactgttgaaaagctacttgcagacaat
caaattgaggtaagggagcatgcagctgcagtattagctggcctcatgaagggtggagat
gctgatctagctgaagacttccgtaacagagcttttagggaagcaaacgtcatcctgaag
aaaagaaggcaaagaaatttgagatccgggctttctgtagcatcaattcatggtcccgta
cttgctttagcagcttgcgtattatccattccgtacgatatgcccagctggctgcctgag
catgttacattacttgctcattttgtttcggagccatcacctgttaaatccacggtcaca
aaagcagttgcagaattccgacggacacatgctgacacctggaatatccaaaaagatgct
tttagtgaagaacagctggaggttcttgcagatacatcctcctcatcatcatatttcgct
taa
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