KEGG   Coffea arabica (coffee): 140004223
Entry
140004223         CDS       T11342                                 
Name
(RefSeq) WD repeat-containing protein WDS homolog isoform X1
  KO
K22382  WD repeat-containing protein 26
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:carb04121]
    140004223
Ubiquitin system [BR:carb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     140004223
   CTLH complex
    140004223
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st LisH_WDR26 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_Aladin EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Tricorn_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_VPS8 eIF2A TPR1-like_2nd TGFBR3_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 140004223
NCBI-ProteinID: XP_071937866
UniProt: A0ABM4X1F6
LinkDB
Position
1c:57672439..57677975
AA seq 511 aa
MENLMIGPKGLIKKQEFVRIIIQSMHALGYRKSAVCLEAESGISCKSVDFESLESHILNA
NWDDCIGALNKLKGLSDETRASALFVVLKQFLLECLSRGEDALALEVLRKQVAGLRMGKE
KVHNLAVGLLFLKELGSNKIDNGIIQEFRKRMIIDLENVLPPPITLPERRLEHLVEMAVS
AQVDNCTYHTSDAITLYEDHHCGRDHFPRETVQILTNHKNEVWFVQFSNNGKYLASSSCD
CTAIIWKVLETGKVTQKHTLKSHQNPVSFVAWSPDDTMLLTCGNMEVLKLWDVETGICKH
TYGNDGFIVTSCAWFPDSKRLVCGSSDPEKGIYMWDSEGNDIKAWKGVRMPKVSDIAVTP
DGQHLISIFSDKEIHILNLQTNAERVISEQHSITSLSVSGDNKFFIVNLNSQEIHMWDVA
GKWVKPWKYEGHMQQKYVIRSCFGGLNSRFIASGSEDSQVYVWNQLSSYPIEILSGHLMT
VNCVSWNPRRPQMLASASDDQTIRIWGPNCF
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggagaatttaatgattgggcccaaaggcctcattaagaagcaggagtttgtaaggatt
attattcagtctatgcatgctcttggatacagaaaatctgctgtctgtctggaagctgaa
tctgggatttcatgcaaatccgtggacttcgagtccctagagtctcacattcttaacgca
aattgggatgattgtattggcgctcttaacaaacttaaaggtttgagtgatgaaacaaga
gcttccgcgttgtttgttgtgttgaagcaatttctgttggagtgtttgagtcgcggcgag
gatgcattagccttggaagttctaaggaagcaggttgctggattgcggatgggaaaagag
aaggtgcataatttggctgttggattgcttttcctgaaggagctggggtcgaataagatc
gataatggtattattcaggaatttagaaaaagaatgatcattgacttggaaaacgtgctt
ccacctcccataacacttccagagagaaggttagagcatttggttgaaatggctgtaagt
gcccaggtagataattgtacgtatcacacttctgatgcaatcacactctatgaagaccac
cactgtggccgggaccattttcccagggagactgttcagattttgaccaatcataagaat
gaagtttggttcgttcagttttctaacaatgggaagtacctagcctcatcatcatgtgat
tgtacagccattatatggaaggtgctggaaactggcaaagtaacacaaaagcacacgcta
aaaagccaccaaaaccctgtctcattcgtagcatggagtcctgatgataccatgttgcta
acctgtggaaacatggaggtgctcaaactctgggatgtggagacaggtatatgcaagcac
acatatggcaatgatggtttcattgtcacctcatgtgcttggtttcctgattctaagcgg
ctcgtctgtggcagctctgatcctgagaagggtatctacatgtgggactctgaaggcaac
gatattaaagcatggaaaggagtacggatgcccaaagtttcggacattgctgtcacacct
gatggacaacatcttatcagcatattttcggacaaggaaatccacatattaaatttgcag
actaatgctgaacgtgtcatttcagagcagcattcaatcacatcactttctgtatctgga
gataataagttctttattgtaaacctcaacagccaagagattcatatgtgggatgttgca
gggaagtgggtaaaaccatggaagtacgagggccacatgcagcagaagtatgtgatacgt
tcttgctttggtgggttgaacagtagatttatcgcaagtggcagtgaagattcacaggtc
tacgtgtggaatcaactgagttcttatccgattgagatcctatctggtcatctcatgacc
gtgaactgtgtgagctggaatcctaggaggcctcagatgttggcttcagcaagtgatgat
cagacaatccgaatatggggtccaaactgtttttaa

DBGET integrated database retrieval system