Coffea arabica (coffee): 140004311
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Entry
140004311 CDS
T11342
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1-like
KO
K03255
protein TIF31
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
140004311
Translation factors [BR:
carb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
140004311
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GFIT
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NCBI-GeneID:
140004311
NCBI-ProteinID:
XP_071932752
UniProt:
A0ABM4WLU4
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Position
2c:76353095..76372787
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AA seq
1910 aa
AA seq
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MAPKNVRGKTKGDKKKKEEKVLPVVMDIRVNLPDETHVVLKGISTDRIIDVRRLLTVNAM
TCNITNYSLSHEVRGPQLKDVVDVAALKPCVLTLVEEDYDEESATAHVRRVLDIVACTTS
FGPSANRDSKADKNAPDTAKASKKSSKSNGGNNKQQHSSPPPTPSSPAAAAAAKDAASID
GEGEMSSACPKLGSFYEFFSLSHLTPPLQFTRKATKQQDDESLGTDHIFSLEVKLCNGKL
VAVEASRKGFSSNGKQQILCHNLVDLLRQLSRNFDKAYNDLMKAFAERNKFGNLPYGFRA
NTWLIPPVAALPPSVFPPLPTEDERWGGNGGGLGRDGKSDLLPYANEFSFLASMPCKTAE
ERQIRDRKAFLLHSLFVDVAIFRAISAVQLVMRMPELAHSAVSTQTIYTERVGDLCVSVT
KDVSDASCKVDTKIDGAQATDVDTEKLIERNLLKGITADENTAAHDTATLGFVNIRFCGH
IVTVKVQGREDENLGPPLQSLELLAQPEGGANALNINSLRFLLHDKVALEQNKCIPHSQT
LESEDLSSSQAFVESILGESLIKLQEEEELRETYVRWELGACWIQHLQDQKKTEKDKKLS
NEKTKNEMKVEGLGIPLKSLKNKKKNSDGSTVESQSGNLKPVADDMSVEAEKSVSLSTES
HAETDANDNELILKTLVSDSAYTRLKESETGLHRKSMQELIGLSQKYYNEVALPKLVADF
GSLELSPVDGRTLTDFMHTRGLRMRSLGQVVKLSEKLSHVQSLCIHEMIVRAFKHILQAV
IASVVKTENLSAVIAAALNMMLGVHENEESSKCCGVHFLVWRWLEVFLKKRYEWDLSSSN
YKDVRKFAILRGLCHKVGIELVPRDFDMNSPNPFRKVDIVSLVPVHKQAACSSADGRQLL
ESSKTALDKGKLEDAVSYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIY
QQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPN
TAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAY
PLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASK
GHLSVSDLLDYINPSHDTSGRDNLGAKKKNYVTKTKGKSYQSSIASPTSEVSPKDPLKGA
SDEEEKQIPEPESSPKINSVSTFQAVESKQNDEDESTEGAQPEPRQIQLCKNAAEKPVPA
DVTSPEAHAEGDEGWQPVQRPRSAGLYGRRLRQRRPTIGKVFSYQKKDDVSNVDHARVKH
NCQSSRYYLLKRRATSPGSYADYYVAKSPPVTKFGRRMVRSVAYRIKSLSSKEAATDSSR
KGGEFSNSPQETGPVSASAEVGSISRKSSIVSLGRSPSYKEVAVAPPGSIPLLQVRVPQS
ETPKSDEAQGNGEEYIEPQKDSESMKVDGEKMKVENIQDAMVNSAYNLEDEQETTDRKET
LSNDPINNKDSEAVSASVTRDQSSCLNIDQMEQECAKTGNKLNSVDSPRAIQFEKDSPVA
CDSGNNLLSTSQGADDQRGVKTAVSFSSDTRELSNKKLSASAAPFNPSPAVARIAPLPMN
IALPSGPGTVPAIGPWPINMPLHPGPATVLPGPICSSPHHPYPSPPPTPNMIHPLPFMYP
PYTQPQTLPPSTFPLTSGPFHANQFAWQHNVNPNASEYVHGTVWPSCHPVEFPTPQPVVE
PITDPTLEPKKECDNSVGLNLEPSFTLDLHSGDEAKKDTRLPASEAVETFNDISGVHLEN
ERVTSASNSPSIPFLGNQSNNPNDHYEDTGKCGKHVPRRHQQKDDNEKTFNILIRGRRNR
KQTLRMPISLLKRPYSSQSFKVMYSRVIRDTEAPKSATFASDETTTPNAT
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaagaatgttcgtggcaagacgaaaggagacaagaagaagaaagaagagaag
gttcttcctgttgtaatggatataagggtgaaccttcctgatgaaactcatgtggttctc
aagggaatttcaacggataggattatcgatgtccgtcgattactcacggtgaacgccatg
acttgcaatattaccaattattcattgtcccatgaggtaagaggcccacaactaaaagac
gtagtggacgttgccgcattgaaaccttgcgttctcactctcgtagaagaggactacgat
gaagagagcgccacggcgcacgttaggagggtgctggatatagtggcctgcacgacgtct
ttcgggccgtcggcgaacagagactccaaggctgacaaaaatgcgccggatacagccaag
gcctccaagaagtcgagcaagtccaatggcggaaacaataaacagcaacactcttcgcct
ccgccaacgccgtcgtctccagctgctgcggctgcggcgaaagatgctgcttcaatcgac
ggagaaggagaaatgagcagcgcgtgccctaagcttggtagcttttacgagttcttttcc
ctctctcatctcactcctcctctccaatttacaaggaaagcaacgaaacaacaggatgat
gagagcttaggcactgatcacattttctctcttgaggtgaagctttgcaatggaaagcta
gtagcagttgaagctagcagaaaaggtttttctagcaatggaaagcagcagattctgtgt
cacaatcttgttgatctgttgagacaactcagcagaaattttgacaaggcctataacgat
ctaatgaaagcttttgcagagcgtaacaagtttggaaatctcccatatggcttcagagct
aacacatggcttattccccctgtagcggcgttaccaccttctgtttttccacctcttccc
actgaggatgaaaggtggggaggaaatggaggtggtcttggcagagatggcaaaagtgat
ttactaccttatgctaatgaattttcatttcttgcttctatgccatgcaagacagcagag
gagaggcaaattcgagacagaaaagctttccttcttcatagcttgtttgtagatgttgcc
atttttagagctatttccgctgtccagcttgtaatgcgaatgccagaattagctcattct
gctgtaagcactcagacaatttatacggagagagtaggagatttatgtgtatctgtcaca
aaagatgtttcagatgctagctgcaaagtagatactaagattgatggggctcaggccact
gatgtagacacagaaaagttaattgaaaggaacctactgaaggggatcacagctgatgaa
aatactgctgcccatgacactgccactctagggtttgttaacataagattttgtggtcat
attgttaccgtaaaagtgcaagggagagaggatgagaatttgggtcctccattacaaagc
cttgagctgcttgctcagcctgaaggaggagccaacgccctcaacattaacagtttgagg
tttcttctccatgacaaagtagctttggagcaaaataaatgcataccacattctcaaact
ttggaatctgaagatctcagttcttctcaagcttttgttgagagtatattgggagagagt
cttatcaagcttcaggaagaagaagagctacgggaaacttatgtgagatgggaacttggg
gcttgctggatacaacatttgcaagatcagaaaaaaacagaaaaagataagaaactgtct
aatgagaagacaaagaatgaaatgaaggttgagggacttggaattcctcttaagtctctg
aagaacaaaaagaagaattctgatggaagtaccgtggaaagtcaatctggaaacttgaag
cctgttgcagatgacatgagtgtggaagctgaaaaatcagtgtcactatctacagaatct
catgctgagactgatgccaatgacaatgagctaatactgaagacattagtgtctgattct
gcttatactcggttaaaagagtctgagactgggcttcatcgcaagtcaatgcaagagctg
attggcttatcacagaagtattacaatgaagttgctcttcctaaactggttgctgatttt
ggttctttggaactctcaccagtggatggtcgaacgttgactgattttatgcatacaaga
ggccttaggatgcgttctcttggacaagttgttaagctctcagagaagttatcacatgtg
caatcgctctgtatacacgagatgattgtaagggcgttcaagcatatactacaggcagtt
attgcttctgttgtcaagactgagaacttgtctgcagtgattgctgctgcattaaatatg
atgcttggggtacatgaaaatgaagaatcaagtaagtgttgtggtgttcattttcttgta
tggagatggctggaggttttcctaaagaagagatatgaatgggaccttagcagctcaaac
tacaaagatgtgaggaaattcgcaattcttcgtggtttgtgccacaaggttggcatcgag
ctggttccaagagattttgatatgaattctccaaaccctttccgaaaagtagacattgtg
agcctagtgccagttcacaagcaagcagcatgctcttctgcagatggacgacaacttctg
gaatcatcaaaaacagctcttgataagggaaaacttgaagatgccgtaagctatggaacc
aaggctctagcaaagcttgtagcagtatgtggtccgtaccatcgaatgactgcaggagct
tatagccttcttgcggtagttctgtatcacactggagatttcaatcaggccacaatctac
caacaaaaggccttggacatcaatgaacgagagttaggacttgatcatccagatacaatg
aaaagctatggagatcttgctgtattctattacagacttcaacatacagagctagctctc
aaatatgtcaagcgagctctatatttgttgcatcttacatgtggcccatcacatcccaat
actgctgcgacatacataaatgtcgcaatgatggaggaaggattgggtaatgtgcatgtt
gccctcagatacctccacaaagcacttaaatgcaaccaaaggctacttggtcctgaccac
attcagacagctgcaagttaccatgccatagcaattgcactctccttgatggaggcatat
cccttgagcgttcagcatgaacagacaaccttgcaaattctacgggcaaagctaggccca
gatgaccttcgcacacaggatgctgctgcatggcttgagtactttgaatccaaggctttt
gaacaacaagaagctgctcgaaatggtactcggaagcctgatgcatctattgccagcaag
ggccacctcagtgtgtcagatttgcttgactacataaatccgagccatgataccagtggg
agagataatctgggggcaaagaagaaaaattatgttacaaagacgaagggaaaatcttac
caaagcagcattgcttcacctacctctgaggtgtctcctaaagatcctctgaaaggagca
tctgatgaagaagagaaacaaattcctgaacctgaaagttctcctaaaataaacagtgta
tccacctttcaagcagttgagtccaagcaaaatgatgaggatgaaagtactgaaggggca
caacctgagccaagacaaattcaattgtgtaagaatgctgcagaaaagccagttcctgct
gatgtcacctctcctgaagcacatgctgaaggggatgaaggatggcagccagtccagaga
cccagatcagctggtctgtatgggcgacgattgcggcagagaaggccaaccattggcaag
gtcttcagttatcagaaaaaagatgatgtttctaatgtggatcatgctagagtgaagcat
aactgccaaagcagtcgatattacctgttaaagagacgggcaacatccccgggaagttat
gccgattattatgtagcaaagagtcctcctgtgactaaatttggtaggagaatggtcaga
tctgtagcatatagaattaagtctctgtcgtccaaggaagcagctacagacagttcaaga
aaaggaggcgagttttcaaattctcctcaagaaactggcccagtttctgcatcagcagag
gttggatcaatatctaggaagagttcaattgtaagcctgggaaggtctccttcttataaa
gaagtagctgtggccccaccaggtagcattcctttgttgcaggttagggttccccaaagt
gaaacacctaaaagtgatgaagctcaggggaatggggaggaatatattgaacctcaaaaa
gattccgagtccatgaaagtggatggagaaaagatgaaggtagagaacattcaagatgcc
atggtaaattcagcttacaatctggaagatgagcaagaaaccactgatagaaaagaaact
ctttccaatgatccaattaataacaaggattctgaagctgtgtctgcgagtgtgacaaga
gaccaatccagctgtcttaacattgatcaaatggaacaagaatgtgcaaagactggtaat
aagctaaattctgttgattctcctagagctattcagtttgagaaggattcaccagtagct
tgtgattccggaaataacttgctctccacgtcacaaggggctgatgatcaaagaggggtc
aaaactgcagtttccttttctagtgatactcgagaattgtctaacaagaagttgtctgca
tcagctgctccattcaatccatcacctgctgttgcacgcattgccccattgcctatgaat
attgccctcccttctggtccaggaactgttccagctattggcccttggccaataaatatg
ccccttcacccagggcctgcaactgttttgccgggtccaatttgctcctcccctcaccac
ccgtacccatctcctccgccaacccccaacatgatacaccccttgcctttcatgtaccca
ccatatactcaaccacaaacattacctccaagtacttttcctttaactagtggcccattc
catgccaatcaatttgcgtggcagcacaatgtaaacccaaatgcttcagagtacgttcat
ggaacagtttggcccagctgccaccctgtagaatttcctaccccacagcctgtagttgag
cccataactgatcccacattggagccaaaaaaggaatgtgacaattctgtgggtctgaat
ttggaaccaagttttacattggatcttcattctggtgacgaggctaagaaagatacaaga
cttccagcatcagaggcagttgaaaccttcaatgatatatctggtgttcatctagaaaat
gagagagttacaagtgcttcaaattcaccaagcatcccctttcttgggaatcaatccaac
aaccctaatgatcattatgaagacactggaaaatgtggtaaacatgttccacggagacac
cagcagaaagatgataatgagaaaacattcaacattttgataagggggagaaggaacaga
aaacagactctgagaatgccaattagtttgctaaagagaccttatagctcacaatcattc
aaggtcatgtatagcagagttatcagagacacggaagctccaaaatctgccacttttgct
tcggatgaaactactacaccaaatgctacttag
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