Coffea arabica (coffee): 140004359
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Entry
140004359 CDS
T11342
Name
(RefSeq) ribosomal RNA-processing protein 8 isoform X1
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
140004359
Enzymes [BR:
carb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
140004359
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
140004359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
MTS
Methyltransf_31
Anamorsin_N
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
140004359
NCBI-ProteinID:
XP_071906374
UniProt:
A0A6P6VHK8
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Position
5c:complement(169641..172343)
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AA seq
295 aa
AA seq
DB search
MTEEERRGIINQQQRSRKRKRGKRHRRKQQVAGDSPPPSLEQTLNANTKNRSSPAAAVVK
CNSKARIFSSSFLDKMKAKLSGGHFRMINEKLYTCTGQEAFNYFKEDPALFNMYHAGYQE
QMSHWPEQPVNVITKWLKDHSPSLIVADFGCGDACLARNVKNKVFSLDLISKDSSVIACD
MSNTPLDSSSVDVAVFCLSLMGTNYSSFILEAHRVLKPRGWLLIAEVKSRFDPSTGGADP
NKFSKAICQLGFTALSKDFSNKMFILLYFKKKEDEKLNVNEIRWPGLKPCLYKRR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaggaacggcgaggaataataaaccaacagcaacggagccgaaaacggaag
agggggaagcgtcaccgccgaaagcagcaggtggccggcgattctcctcctccttctctc
gagcagacccttaacgctaatactaagaatcggtcttctccagctgctgctgttgttaag
tgcaattccaaagcaagaatcttctcgtcttcgttcctcgacaagatgaaagcgaagtta
tcaggaggacactttcgcatgattaatgagaaactctacacttgcactggacaggaggca
ttcaactatttcaaagaagatccggcattgttcaatatgtatcatgcaggatatcaagaa
caaatgtcacattggcctgaacagccagttaatgtaatcacaaagtggttaaaggatcac
agcccatctttaatcgttgctgattttggctgtggggatgcatgtcttgcaagaaatgtt
aagaataaagtcttctcccttgatctcatttccaaggactcatcagtgattgcttgtgat
atgtcgaatactcctcttgattcttcatccgttgatgttgcagtattttgtctctctttg
atgggaactaactactcaagttttattctggaagcacacagagttcttaagccgcgtggg
tggcttttgattgcagaagtgaagagcaggtttgaccccagtaccggcggagcagatcca
aacaaattttcaaaagcaatatgccaactgggattcaccgccttgtcaaaggacttctcc
aacaaaatgtttatactgctatacttcaagaaaaaggaagacgaaaagctaaacgtaaat
gaaatcagatggcctggactgaagccatgtttgtacaagcgtcgatga
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