KEGG   Coffea arabica (coffee): 140004389
Entry
140004389         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    140004389
Spliceosome [BR:carb03041]
 Complex A
  U2 snRNP components
   U2 related factors
    140004389
 Complex B
    140004389
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 RRM_1 zf-CCCH_DUS3L zf-CCCH_4 RRM_MUD2_C MmoD
Other DBs
NCBI-GeneID: 140004389
NCBI-ProteinID: XP_071936002
UniProt: A0ABM4WW49
LinkDB
Position
2e:21284595..21294126
AA seq 889 aa
MTERIELAMAEEEQEQGEEGIKDGCSMSEPSSAAAVASICRKEKRKASKKEKRKQKRKEA
AEKERQEEEARLNDPEEQLRLQLEEERERERVERERREFEERERLFLEALARKKAQEEEE
EEQRRIMTEEELKLKENQVGLETEANGEDEWEYIEEGLPEIIWQGNEIIVKKNKVKMKKK
DAEQKWEEDPDRPTSNPLPPQSEAFADFKSSSTVSAQQLLENVAQQIPNFGTEQDKAHCP
FHLKTGACRFGSRCSRVHFYPEISCTLLIKNMYNGPGLAWEHDEGLEYTEEEVERSYEEF
YEDVHTEFLKFGEIVNFKVCRNGSYHLRGNVYVHYRELDSAVLARRFINGRYFAGKQVNC
EFVGVTRWKVAICGEYMKSKLKTCSRGTACNFIHCFRNPGGDYEWADWEKPPPKYWVKRM
AALFGYSHESGYDKWVEQETKGQRRNSSKSLIADEERYRSRRSLSREIKSSNSSPRDNYK
EDKFRRSKYSKRYRSDDTKRLEVPDEREYEEERQSRSHQRGKRGQYEREFDRAWLDEEKD
ADGYYYSTRNTRESSRSPFRRRSQSHDCREIDKRKIPEKISRKNHALSGTANDSDCNKEA
SAYTDSGRDFSHENKDCISSRDLLYRRGASDSDSAGDWSDWIIESRRVQTRKSSARVDEA
AGFSSDLQESGKSLHDKYDENGSEHAKPNLQRGWRRTSSCKRKTRGDDYSDEDEDSDTRG
RREIDKDDTREHHRHNHSSRKTRKADYADYADENIDERGHLETEKVDSREHHKHNRSGRK
TSKADYADKHDEDIDKRGCWEPEMVDAREYHKHNHSSRKTRKCDYAGEHHEDIDKGGHWE
PEKLDTREHHEHRRKSHGRSGSHDQNVDKHSRKSRSSNQKRKSYSRERD
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgactgaaagaatcgaattggcaatggcggaagaagaacaggagcaaggggaagaagga
ataaaagatggttgttcaatgagtgagccgagctcggctgcggcggtggccagcatttgc
cggaaggaaaaaaggaaggcgtcgaagaaggagaagaggaagcagaagaggaaggaggca
gcagagaaggagcggcaagaagaggaagctcgactaaacgatcctgaggagcagctccgt
cttcagctcgaagaggagagagagagggagagggtagaaagggaaaggagagaattcgag
gagagagaacggctgttccttgaagccttggctcggaaaaaagctcaggaagaagaagaa
gaggagcaaagaagaataatgacagaagaagaactaaaattaaaagagaatcaggttgga
cttgagactgaggcaaatggtgaagacgagtgggaatatatagaggagggccttccagaa
attatttggcagggaaatgagataattgtcaagaagaataaagtcaaaatgaaaaagaag
gatgctgaacagaaatgggaagaggatcctgatagaccaacatcaaatcctcttcctccg
caatctgaagcttttgctgatttcaagagttcatcaaccgtatcagctcaacagttgttg
gagaatgttgctcagcaaattccaaactttgggactgaacaggacaaagcccattgtcca
ttccacctgaaaacaggggcctgtcgttttgggtctcgatgcagcagagttcacttttac
cctgaaatatcttgtacgttgctcatcaagaatatgtacaatggacctggccttgcctgg
gagcacgacgaggggcttgagtatactgaggaggaggttgagcgttcttatgaagaattt
tatgaggatgtgcatacagagtttctgaaatttggagaaatagttaacttcaaggtttgc
aggaatggttcatatcatttgcgagggaatgtctacgtacactaccgagagttggattct
gcagttcttgcccgccgttttatcaatggccgttattttgctggcaaacaggtgaattgt
gagtttgttggtgtaacaagatggaaagttgccatttgcggagagtatatgaagtcaaag
ctcaagacatgttctcgtgggactgcatgtaatttcattcattgtttccgcaatcctggt
ggggattatgagtgggctgattgggagaaaccacccccaaagtattgggtgaaaaggatg
gctgctttgtttggttattcacacgagtctgggtatgacaaatgggttgaacaagaaacc
aaaggacaacgtaggaactccagcaaaagtttgatagctgatgaagaaagataccgctct
cgaagatctttgtctagagaaataaaatcttcaaacagtagtccaagagataattacaaa
gaagacaagtttaggaggagtaaatacagcaaaaggtacaggagtgatgacacaaagagg
ctggaggttcctgatgaaagagaatatgaagaggaaagacaatcccgaagccatcagcgt
ggcaagagaggacaatatgagagggaattcgatagagcttggttggatgaagaaaaagat
gctgatgggtactattacagcacaagaaacacaagagaaagctccagaagcccctttagg
agaaggtcacaatcacatgattgtcgagaaattgacaagcgcaaaattccagaaaagatc
tcaagaaaaaatcatgcgttatctggaactgcaaatgatagtgattgcaataaggaagca
tccgcttatactgattctggccgggacttttcacacgagaataaagactgtatatcctca
cgagaccttttgtataggaggggagcctcagatagtgattccgctggagactggtccgat
tggatcatagagagtcgccgtgtgcaaacaagaaaatcatcggcacgtgtagatgaagct
gcaggattttctagtgatctccaggaatcagggaaaagtttacatgacaagtatgacgag
aatggatctgaacatgctaaacccaatcttcagagaggctggagacgtactagctcttgt
aaaaggaagaccagaggagacgattattctgatgaggacgaggatagtgacacaagaggc
cgccgtgaaattgacaaagatgatacaagagaacaccataggcataaccattcgagtaga
aagaccagaaaagctgattatgctgattatgctgatgagaacattgacgaaagaggccac
ttggaaactgaaaaagttgattcaagagaacaccacaaacacaaccgttctggtagaaag
accagcaaagctgattacgctgataagcacgatgaggacattgacaaaagaggctgctgg
gaacctgaaatggttgatgcgagagaataccataagcataaccattcaagtagaaaaacc
agaaaatgtgattatgctggtgagcatcatgaggacattgacaaaggaggccactgggaa
cctgaaaaactcgatacaagagagcaccatgaacatagaagaaaatctcatggcaggtct
gggtcacatgatcagaatgttgacaagcactctagaaagagcaggtcaagcaaccagaaa
aggaaatcttattcgagggagagggactga

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