Coffea arabica (coffee): 140004503
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Entry
140004503 CDS
T11342
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
KO
K12184
ESCRT-I complex subunit VPS28
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140004503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
140004503
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
140004503
Membrane trafficking [BR:
carb04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
140004503
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140004503
Exosomal proteins of other body fluids (saliva and urine)
140004503
Exosomal proteins of colorectal cancer cells
140004503
Exosomal proteins of bladder cancer cells
140004503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
140004503
NCBI-ProteinID:
XP_071930356
UniProt:
A0ABM4WF08
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All DBs
Position
2c:9801962..9805580
Genome browser
AA seq
211 aa
AA seq
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MNMEVKLWNDKREREMYDNFAELFAIIKATEKLEKAYVRDIISPIEYETECQKLIAHFKT
LSSTLKDTVPNIERFHDTYKMDCPAALNRLVTSGVPATIEHRAAAAMSATTSAAIVAECV
QNFITAMDSLKLNMVAVDQVHPLLSDLSASLNKLSILPHDFEGKTKMREWIARLSKMGAA
DELTEQQARQLHFDLESSYNSFMAALPAAGT
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggaggtcaagctatggaatgacaagcgtgaaagggagatgtatgacaacttt
gctgagctttttgcaattataaaggccaccgagaagcttgaaaaagcttatgttcgtgac
atcatatcaccaatcgagtatgaaactgaatgccaaaaactgattgcacattttaaaacc
ctgtcttcaacattgaaagatactgtgcccaacattgagcgatttcatgacacatataaa
atggactgccctgctgcccttaatcggctggttacctcaggagttcctgccaccatcgag
catcgagctgctgctgcgatgtcagccactacctctgctgctatagtggcagaatgcgtg
caaaacttcattactgctatggactccctgaagctaaacatggttgctgttgatcaggta
catccacttctttcagatttgtctgcttccctgaataaactttcaatcctgccccatgat
tttgagggcaagacaaagatgagagagtggatagccaggctgtcaaagatgggagctgca
gatgagttgacagagcagcaggctcgacaacttcactttgacctggaatcgtcttataat
tcattcatggcagcattgcctgctgctggaacttag
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