Coffea arabica (coffee): 140004539
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Entry
140004539 CDS
T11342
Name
(RefSeq) anaphase-promoting complex subunit 1-like isoform X1
KO
K03348
anaphase-promoting complex subunit 1
Organism
carb Coffea arabica (coffee)
Pathway
carb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140004539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
140004539
03036 Chromosome and associated proteins [BR:
carb03036
]
140004539
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
140004539
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
140004539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC1
APC1_C
Apc1_MidN
APC1_3rd
PC_rep
Motif
Other DBs
NCBI-GeneID:
140004539
NCBI-ProteinID:
XP_071934484
UniProt:
A0ABM4WRS9
LinkDB
All DBs
Position
2e:5259112..5282553
Genome browser
AA seq
1824 aa
AA seq
DB search
MPVGDRQLNVLGEFKPFGSVAEAFDGKSSSDNPQDDYSYFLFDPEVARQRDDAENTVCTS
STTDGSEHELFIRGNRIIWSIGARVYKRFSFPSKVLKACWCRMGDLSEALLCVLQINSLT
IYNTSGEVASVPLPHSIISVWPLPFGLLLQDAPEGNFSVHIPFSFPSASLSTRDIARSRR
EVGYSSQTNSTVTHAFDFIYKADGTSGSSHLILKDPLEEPQPTYIEERGKLNIMKEFDER
TIWTSNCVPLMASYNKGKMQHSVWVAEIINSNLEVVKSGLSDVVPAGVLTKQISFRRIWQ
GKGSHAAASKVFLATDDDAVQIICFLLHDQKKLLSVRLHSVEIDDEIVYDIKPDMSWSIP
AIAAEPVIVTRPRVNIGLLPFADIIALTLENSLLLYSGKQCLCRYTLPSFLGNHQLSWVT
KSSETSIIHEIKATGLTDAVQGRVNVVVNSGKIYRCILRCNPSSSLVNDCITAMAEALNP
SFYNRFLVLLWGDSGSAFMAKVDSAVNSEWESFCHVVMTLSRRSSDVSLKLSSSDSHSSW
EFLINSMYHKNYGKHKSIAGIPPVASCNLQGSDSSRSLLMRTDNHEESFYIELLKEILDS
LHAVYENLKLDILRKRDVSLLVVLLCNIADSLHEEGYLDYYMRDFPSLSNDFGMCQSSLM
NKTPPSLFRWLESCLLHGYSSAKISDLPFLIRKDGTSAVCWARKIVSFYSLLCGAEQLGK
GLSSGVCYTVASGSHSTKEELVVLAMVGEAFGLQELDLLPVGVSLPLRHALAKCRDSPPT
DWPAAAYILLGREDLAWSCPVHPRKPKENELHTNGSLTFQSAPYMAHLQPVTIPSLVSDT
IELENTKLEDVDSVDGSLMDGMEHIFNSSTQLRYGRDLRLNEVRHILCSARAIAIQTPVS
PTASDQDLQQAQLWQLAQRTTSLPFGRGAFTLATTCTLLTEALTVPKLVLAGRLPAQQNA
TVNLDPNVRNVQELKCWPEFHNAVAAGLKLAPLQGKMSRTWIVYNKPEEPNVVHAGLLLA
LGLHGHLRVLTITDIYQYYSQEHESTTVGLMLGLAASYRGTMQPAISKSLYVHIPARHPS
SFPELELPTLLQSAALLSVGLLYEGSAHPQTMQILLGEIGRRSGGDNVLEREGYAVSAGF
ALGLVALGRGEDAPGFMESLVDRLFQFIGGKEQKTERFYFLTQPVDEHQRTVGQVMDGTL
VNIDVTAPGAIVALALMYMKTESKLMLSRLPIPQTHFDLQYVRPDFIMLRVIARNLILWS
RIYPSEEWIQSQVPKVVQHCIDGLADEMDDANDMDAEAFVQAFVNIVVGACISLGLRFAG
TRDGRSQELLYDYAVYFLNEIKSVSVSSKHSLPKGLSNYVDRGTLETCLHLIVLSLCVVM
AGSGHLQTLRLLKFLRNRNSTEGHSNYGAQMAVSLGIGFLFLGGGMRTFSTSNTSIAALL
ITLYPRLPAGPNDNRCHLQAFRHLYVLATEARLVQTVDVDTGMPVYAPLEITVRETEHYA
ETSFCEVTPCILPECAVLKTVRVCGPRYWPHVIELIPEEKPWWASGDKDDPFNSGFLYIK
RKVGACSYVDDPVGCQSLLSRAMHKVGLACLRTSSTRTERMGAVTLDQLISTFSSDPSLI
AFAQRFCEPSWNNSSDVDFQEFCLQVLFECVSKDRPAFLQVYLSLYTTIGSMVDEITSAT
CSLGDSLSLWSIKLALAYNEALLNGRLTIPNGGIVQSTFLGSLKKRLEEILNLSLCVTND
FHEYLLSGRWPKKDTTGWKRSILLSWYLQWHGVPPSIGVRSAREKIKLVNISSSVPLLHL
LFPGTHVTAISEIYRCWLSSRVDN
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcggtgatcggcaactgaatgtgcttggcgagttcaaaccattcggctcggtc
gccgaagctttcgacggcaaatcttcttctgacaatccccaggatgattactcatacttc
ttgttcgacccggaagttgcccgacaaagagacgacgccgagaacacggtctgcacatcg
tcgactaccgatgggagtgaacacgaactcttcatcagaggaaaccggataatatggagc
attggtgccagagtgtacaaaagattcagttttccgtccaaagtcttgaaggcatgttgg
tgccggatgggtgatttgtcggaggctcttctttgtgttcttcagatcaatagtttgact
atctacaatacatcaggtgaagttgcatctgttcctcttcctcacagcattatatcagtt
tggcctcttccatttggtttactcttacaagatgcacctgaagggaatttctcagtgcac
attccattttcgtttccttctgcatctctaagcactcgtgatattgctcgttcaagaagg
gaagttggatacagctctcaaactaactctactgtaactcatgcctttgattttatctac
aaggctgatggaacttcaggatcctcacatttgatattgaaggatccactggaagaacct
cagccaacttatattgaggaaagaggaaaactaaacatcatgaaagagtttgatgaacga
acaatatggaccagtaattgtgttcctctgatggcatcatataacaaaggaaagatgcaa
cattcggtgtgggttgcagaaattatcaactctaacctcgaagtggtaaaatctggatta
tctgatgtagtgcctgctggggtgctaacaaaacaaatttccttccgaaggatatggcag
gggaagggctcacatgctgctgctagtaaggtgtttttggcaactgatgacgatgctgtg
caaattatttgctttcttctccatgaccaaaaaaagttgctatcagtccggcttcatagt
gtagaaatagatgatgaaattgtttatgatattaaacctgacatgagctggagcattccg
gcaattgctgcagaacctgttattgttacccgtcctagagtgaacattggcctgcttcca
tttgcagacatcattgctttaacgttagagaacagccttcttctctattctgggaagcaa
tgcctttgtagatacacattgccttcatttttgggtaaccatcagctgtcgtgggttaca
aagtcttcagagacatccattattcatgaaataaaagctactgggttgactgatgctgtt
caagggcgtgtaaatgttgttgtaaatagtggaaagatataccgatgtattcttcggtgt
aatccttcatcatcactagtaaatgattgcatcacagccatggctgaagcacttaaccct
agtttctacaatcgctttcttgttttattatggggtgatagtggttcagcttttatggca
aaggtggattcagctgtcaattcagaatgggagtccttctgtcacgtggttatgacactt
agcagaaggtctagtgatgtctctctaaaactttcgtcttctgattcacattcatcatgg
gagtttctgatcaacagcatgtatcataagaactatggcaagcataagagtattgctgga
attccacctgtggcatcgtgtaaccttcagggatcagactcatcccggtcacttctaatg
agaacagacaatcatgaagaatcattttacatcgagttattaaaggagattcttgattca
cttcatgcagtatatgaaaacctgaaacttgacattctccgcaagcgggatgtaagtctt
cttgtagttttactgtgcaatattgctgattctttgcatgaagaaggctatttggattat
tatatgcgcgattttcctagtctttcaaatgactttggaatgtgccagtcatcattgatg
aataaaactcctcctagtctttttagatggctagaaagctgtttgctacatggatatagt
tcagctaaaattagtgatcttccttttctaattcgtaaagatgggacttcggctgtttgt
tgggcaaggaagatagtatccttttacagtctattgtgtggtgcggaacaattgggaaag
gggctgtcatctggtgtttgctacactgtagcatctggatcacattctactaaagaggag
ctggtcgttttagccatggttggagaagcatttggtttgcaagaattagacttgctgcct
gttggtgtctctcttccattgcgccacgcactagctaagtgccgtgattctcctcccact
gactggccggctgctgcatatattctccttgggcgggaagatcttgcctggtcatgtcct
gttcatccaagaaaacccaaggaaaatgagcttcatacaaatggaagtttgacttttcag
tctgccccttacatggctcacctgcagcctgtgacaattccttccttagtttcagataca
attgagttggagaatactaagctagaggatgttgattcagttgatggatctttgatggat
ggaatggagcatattttcaattccagcactcagttgcgatatggtcgtgatctgcgttta
aatgaggttagacacatattatgttctgcaagggcaatagcaattcaaacaccggttagt
cctacagcatctgatcaagacctccagcaggcgcagttgtggcagcttgctcaaaggact
acttccctaccttttggtcgtggtgctttcacacttgccacgacatgtactcttttaaca
gaggcactcacagtcccaaagcttgttttagcaggccggttacctgcacaacagaatgca
acagtaaatttggatccaaatgttagaaatgtacaagaactcaaatgttggcctgagttt
cacaatgctgttgctgctggactgaaacttgctcccctgcaggggaagatgtcaagaaca
tggatagtatacaacaagcctgaagagcccaatgttgtccatgccgggctccttcttgcc
ttggggttacatgggcatcttcgtgtactgaccataacagacatataccaatactattcc
caggaacatgaaagcacaactgtagggctaatgcttggtctagctgcatcatacagggga
actatgcaacctgctatttctaagtctttatatgtgcatatacccgctcggcatccctct
tccttcccggaactagaattaccaactcttctacagtcagcagcacttctgtctgttggg
cttctttatgaaggttcggcacacccacaaacaatgcaaattcttctgggtgaaataggt
cggagaagtggaggtgataatgtgcttgaaagggagggctatgcagtttctgccggattt
gctttggggctcgttgccttgggtcgtggtgaagatgcccctggcttcatggaaagtttg
gttgatcggttgttccaatttattggtggcaaagaacagaaaactgaaagattctatttt
cttacgcaaccagttgatgagcaccagcgaactgttggacaggtaatggatggaacttta
gtaaatattgatgttactgcacctggagcaatagttgctttggctctaatgtatatgaag
acagaatcaaagctaatgctgtctcggctgcctattccacaaacacactttgatttacaa
tatgtcagacctgattttataatgcttcgtgtcattgcacggaatttgatactttggagc
agaatttatccttctgaagagtggattcagtcccaggtccccaaagttgtccaacattgc
atcgatggcctagcagatgagatggatgatgccaatgacatggacgccgaagcttttgtt
caggcattcgtcaatatagtggttggagcatgtatttctcttgggctgagatttgccggt
acccgggatggaaggtcacaagagttgctttatgattatgctgtctacttcctgaatgag
ataaagtcagtttctgtttcaagtaaacattcgttgccaaaaggactgtctaattatgtt
gatcgtggcacccttgagacgtgtcttcatctcattgttctctccttatgtgtggttatg
gctggttcaggacatcttcaaactttgagattattgaaattccttagaaaccgaaattca
acagaggggcattctaattatggtgctcagatggcagttagcttgggtattggtttcttg
tttcttgggggtggaatgaggactttctcaacgagcaatacctcaattgctgctttatta
attaccctctacccacgcttgcctgctggaccaaatgacaatagatgccaccttcaggca
ttcaggcatttatatgttcttgcaactgaagctcggttggttcagacagttgatgttgac
actggtatgcctgtttacgctcctcttgaaattactgttcgagaaactgaacactatgct
gaaacaagcttttgtgaggtcaccccttgcattctccctgaatgtgctgttttgaagaca
gttcgtgtttgtggtccacgttactggcctcatgtcatagagctcattcctgaggaaaaa
ccttggtgggcttctggagacaaggatgaccctttcaattctggttttctttacataaag
agaaaagttggagcctgttcatatgtggatgatcctgtaggatgtcagtctctgttgtca
cgagcaatgcacaaggttggtttagcatgtttacgaacttcatctactagaacagagcgc
atgggtgcagttactttagatcagttgatcagtacattctcatctgatccaagcttgatt
gcatttgctcaacgtttttgcgagccttcctggaacaacagttctgacgttgacttccag
gagttttgccttcaagtgttgtttgagtgtgtgagcaaggataggccggctttcttacag
gtgtatctgtcattgtacacaaccattgggtctatggttgatgagattactagtgctact
tgctctctaggagattcgctttctctctggagtataaagcttgcacttgcctataatgaa
gctttgctcaatgggagattgacaattccgaatgggggcattgtgcaatccacttttctt
gggtcgcttaaaaagcggttggaagagattctgaacctttctttatgcgtcacaaatgat
ttccatgagtacctattgtcggggagatggccaaaaaaagataccacgggatggaagcga
tcaatacttctttcttggtatctacagtggcatggtgtaccgccttcaattggagttaga
agtgctcgagagaaaatcaagcttgtcaacatatcctcgtcagttcctttgttgcatttg
ttgtttcccggaactcatgtcactgcaattagtgagatctacagatgctggttgtcttcc
cgggttgacaattga
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integrated database retrieval system
