KEGG   Coffea arabica (coffee): 140005296
Entry
140005296         CDS       T11342                                 
Name
(RefSeq) serine/threonine-protein kinase ATM-like isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    140005296
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:carb01001]
    140005296
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:carb03032]
    140005296
   03036 Chromosome and associated proteins [BR:carb03036]
    140005296
   03400 DNA repair and recombination proteins [BR:carb03400]
    140005296
Enzymes [BR:carb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     140005296
Protein kinases [BR:carb01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   140005296
DNA replication proteins [BR:carb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    140005296
Chromosome and associated proteins [BR:carb03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    140005296
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    140005296
SSDB
Motif
Pfam: TPR_ATM PI3_PI4_kinase FATC FAT TAN M-HEAT_ATR
Other DBs
NCBI-GeneID: 140005296
NCBI-ProteinID: XP_071902179
UniProt: A0ABM4U4H7
LinkDB
Position
4c:13248897..13296878
AA seq 3025 aa
MTAKVTSRDVQEIVSKLSSDKAKAREDGIKLLNTWLEGERSIVFCKYISEKSALLKPDEL
PHSETWPFIISLLAQCVTLEIQSSKKRLPKLGFAKTLRIVVQRAEDRKFSGKNLLLVPVV
KLLFNHIWDVLRDVPSFQSEYGVILRHLLQVQHYRLHIRKRVYSGLVLLYMEKVETSLDV
KTSSYSNPKEEVFRCILTLHSLLENPPGDFPADLRGDIVKSFIGIFCHIREEGKISRKLI
ECLNTYLLKDGPNLDSQNLEIHDSVQQFVFRCWLTTHDRSLKDALVLYARLQLNLTRVTG
DGNALLEQLEEVLSKELDQMTTSSSNLPWNDITRDEKCGILTCSQQRFLELAAVVFWRAC
ANTSKPASAEKRARREHMVVQVKDGLMNGKWSWHAAFCFLIRNYSSRIRKDLIIYWFESI
CASFDRIINDANVEHTYDGLLWTLRSLQRLSSLLLFPSSRGDLSPKSSFFMNEFGKFWHT
IWSCTVRGLPIFSNITSVAEAALVLLRNMILSDKLITFSVPRDIWDLRLFTHLPSASVLC
FVSCYFSSRASQGDLHEALHVRQNLLKAVLALLNWKESSMLNDQLVVMLPPAVYALCAGC
APLSHSVPEAGMNWVMAEEQEQENVHEFCELSVEVLASISHESTPQDFLPECCQNVRLPM
KLRDLLCHEVETRTLEALKEIEIKKMLLSDIFLTCALLSNLIYCSCSMRHRDEKSYFLTK
LGEYMIGLLDQSASILERTHNDIICGCAGSSPVFNSMDSIVASFNSFVSSPFFSKWRDKN
DIDVVIYTGIVESIERLLKGLANLYDACSDNGKDVCSGVDLPDDFDNKMLQNDPADNSKS
IIVDMELDVNSDSKDMDILNLDGKVTHGFAFSSENLKMDVLSFISSFFSVLPSLTWDTLF
DLIEKDGNQRVLENLVSCLCQHPHWSSHRRVSELIMSLNNVVDMQANLKLQCIRTLDAIC
SLVRNILLARTAKDKNVSSLWDRISEEELISLGDLINKVDEKNLVDWCGRTKLIGCICDF
VLLKPEIGQSMIEKLLGMLRDSDYRVRFCLAQRIGILFQTWDGHNELFQDICSNFGPRLV
IFSKDRVVTAKEVLAAGPQAGSLLETTIITLMHLAVESEKIELEAVFMMSVVAAIDPSQR
ELVTAVLDNLSRELNYTSRAKYMEELIGPLLFWWVACGVSLVALVEIRDLFVSSVEPCNF
ILYCCQWLLPALLLNEDFSNLNWVAKIACQPLATLVKIHFVHVFSVCMALHCSKKTGWKK
GSAVLESLILRIAEISENERDKLIKRHMVSIVNHLFSLAAASADPAPPLFSRDTIVHAIE
TVVDGFLEMEDRSRSAGLVDKINIFRPDRVFSFIVEMHYKVTAAAHQRHKCHRLGGIEVL
VNVLGHRAGVSSSFIYLLNLVGQCIGRDALLNQCCRIISTLLKIYKDCPSDETTRVLGEQ
LQFLISKLVLCYSPYDNDGENPVACSSDVLPLLRELILHSDASLYEYIKELEPLPDLDMF
SDIRKFHEELCLDYSAKNHLVNLAKRSLYLPPRVLVWSLQALHKRFFEEEACQGWKRAKL
GFLNEYWHSDQDIVSAIWHLVRMCSLDDTDNFATLVSDFVSRVGIDDPHRVVLHLPGEIS
HAPRFEEDKAEKGTDRLVQLDTVVSDKLLNSLIRLLKKYLMDDSVKIIDMTSQALRGILS
TEKGQRALLLFDQHEKSLIEVHSKGVNTELVQKLVSDLEAKFNAEAISLENSAMWKTRDK
TFDMWVCPLVYGLIGYCDDIIIRLCQDICLVKSEVAELLFPSVMVNLAWRKDLDVDLCKL
ISFQVRENIFIESNTLMKSIKVMLDALNQLRLCHMLERSTSLPGSCKRENSKHTKASSYG
SKSHSTSGKPKDNSSSRLVTSTLSWEKVYWLPIDYLVVAKSAINCGSYFTAVLYVEHWCE
HHFDSLTLGSPDFSHLEILPSHIEILVSAVTQINEPDSLYGIIQSHKLTSQITMFEHEGN
WTKALEHYDLLVQSGLKEPISGHPKSLSSDESQPVVPALLSKSKDQIMQKRPFKGLIRSL
QQIGCTHVLDVYCQGLASLKGQLQHDLEFTELQYEAAWRAGNWDFSLLNGVATPVLDQKI
KCGHFNENLHSCLRALEEGEFDEFHTKLRDSKKELLLSICHASKESTEYIYSAMVKLQIF
YHVGMAWGLRWSMLCKKTVASSVTLRLSSEPIDPFMDQLSWLNKDWRRILEQAQLHMNLL
EPFIAFRRVLFEILNCRDFKLQHLLEAASTLRKGIQFSQAAASLHEFKSLCTAMGKEHSN
VYWHGRQLEEAKLLRAQGQHEMAINLAKYIAQDSQFDDYTSDVFRLVGKWLAETRSSNSR
TVLDKYLKHAVSLADNLKATDRKSIAKQCQMHFHLSHYADALYRTNEERLNSNEWQAAMR
LRKFKAKELKALIKRLKSSSKGEQTEYSLKIQELQKQLAMDGEEEEKLQEDRDNFLTTAL
EGYKRCLVIGDEYDVRVVFRLVSLWFGLSPRPIVINGMISTIKEVQSHKFIPLAYQIASR
MGSTKDQGPHSFQFALVSLVKKMAIEHPYHTIFQLLALANGDRIKEKQRSRNSFVADMDK
KVAAENLLIELHSYHGDVIRQMKQMVEIYIKLAEMETKREDTNRKVTLPRDIRSVRELEL
VPVITSNFPVDRSCQYCEGSFPHFKGFTDSVTVMNGINAPKAVECLGSDGKMYRQLAKSG
NDDLRQDAVMEQFFSLVNTFLQNHRETWKRRLRIHTYKVVPFTPCAGVIEWVTGTVPLGD
YLTGSTRNGGAHGRYGQGDWTFLKCRHHMATESDKRRAFQEVCENFRPVMHYFFLERFLH
PANWFEKRLAYTRSVATSSMVGYIVGLGDRHSMNILIDQATAEVVHIDLGVAFEQGLMLK
TPERVPFRLTRDIIDGMGVTGVEGVFRRCCEETLSVMRANKEALLTIVEVFIHDPLYKWA
LSPLKALQRQKETDYDLETSLEGSEEDEYEGNKDAARALLRVKQKLDGYEEGEMRSVRGQ
VQQLVQDAIDPDRLSQMFPGWGAWM
NT seq 9078 nt   +upstreamnt  +downstreamnt
atgaccgccaaggtcacttccagagatgttcaagagattgtttccaaactctcctccgat
aaagctaaagccagagaagatgggataaagctgttgaatacttggcttgaaggcgaaaga
tcgattgtattttgtaaatacatctcggaaaaatctgcattgcttaaacctgatgaactt
cctcactcggagacgtggccttttattatatcgttgcttgcacaatgtgtgacgctggag
atacaatcaagcaaaaagcgtttgccgaaattaggttttgcgaagactcttaggattgta
gttcaacgtgctgaggatcgtaaattttccggcaagaatttgcttcttgttcctgttgtg
aaattgctttttaatcacatctgggatgtcttaagagatgtccccagctttcaatctgag
tatggggtcattctccggcacctgttgcaagtacaacattatcgattacatatcagaaag
cgtgtatactctggtcttgtgcttttgtatatggaaaaagtggaaacaagcttggatgtg
aaaactagtagctactcgaatcctaaagaggaggtctttcgttgcattttaactcttcac
tctcttcttgaaaatcctcctggggattttcctgctgatcttcgaggggacattgtcaag
agcttcattggaattttctgtcatatcagggaggaggggaaaatttcacgcaagctaatt
gaatgcctcaacacatatttgttaaaggatggtccaaatttggattcccaaaaccttgaa
atccatgattctgttcagcaatttgtgttccgctgctggttaactacacatgatcgaagc
ttaaaggatgcacttgttctttatgcaaggttgcaactgaatttgaccagggttactggt
gatgggaatgctttgttagaacaactcgaggaggtgctaagcaaggaactggatcaaatg
actacttccagcagtaatttaccctggaatgatataacaagagatgaaaaatgtggtatc
ttaacatgttcacagcaaaggttcttggagcttgcagctgttgttttttggcgggcatgc
gctaacacatcgaaaccagcatcagctgaaaaacgagcaaggagagagcacatggtggta
caagtgaaagacgggctgatgaatggaaagtggtcatggcatgctgctttctgttttctt
attcgtaattactctagtcgcatcagaaaggatcttatcatctattggtttgaaagcata
tgtgcaagctttgacagaatcataaatgatgcaaatgtggagcatacttatgatggcctg
ctgtggactttgcggagtctgcagagactttcttctttgctgctttttcctagttcaaga
ggggacctttcaccaaagtcatcttttttcatgaacgagtttggcaaattttggcataca
atatggagctgtactgttcgtggtttgccaatattcagtaatatcacttcagttgcggaa
gccgctttagtgctccttcgcaacatgatattgagcgataagctcattacattttctgtt
cctcgagatatatgggatctccggttattcactcatttaccatcagcatctgttttgtgc
tttgtgtcttgctacttctctagtagagcctctcaaggtgatctccatgaggctttgcat
gtcagacagaatctcttaaaagctgttttagctcttctgaactggaaggagtcctctatg
ttaaatgaccaattggtggtgatgttgccgccagctgtttatgctctttgtgctggttgt
gctcctttgtcacactctgttcctgaagctggaatgaactgggttatggcagaagaacag
gagcaagaaaatgtgcatgagttttgtgaactctctgtggaagtccttgcaagcattagt
catgaatccactcctcaggattttctacctgaatgctgccaaaatgtgcgtcttccaatg
aagttaagagatttgctatgtcatgaagtggaaactcgtactcttgaagctctaaaggag
atagagattaagaagatgctcctttctgatatcttcttgacatgcgctctcttatctaat
ttgatttactgctcatgttcaatgaggcatagagatgagaagtcctatttcttaaccaag
ctgggagagtacatgatagggttgttggatcagtctgcttcaatcttagaaagaactcat
aacgatatcatatgtggttgtgcaggctccagtcctgtttttaatagcatggattctatt
gttgcttcgtttaacagttttgtttcctctcctttttttagcaaatggagagataagaat
gatatcgacgttgtaatctatactgggattgtagaatctattgagagacttctgaagggt
ttagctaacctatatgatgcgtgttctgacaatggaaaagatgtttgttcaggagtagat
cttcctgatgattttgataataagatgttacagaatgatccagccgataatagtaaaagc
atcattgtggatatggagttggacgtcaacagtgattctaaagacatggatattttaaat
ttggatgggaaagttactcatgggtttgctttttcatctgaaaatctgaagatggatgtt
ttgtctttcatttccagttttttctcagttttgccttctctaacatgggataccttgttt
gaccttattgaaaaggacggcaaccaaagggtgctggaaaatcttgtttcctgtttatgc
cagcatcctcactggtcttcccatagaagagtttctgaattgattatgtctctgaataat
gttgtagatatgcaagcaaacctcaaactccagtgcattcgtacccttgatgccatctgc
agtttggtgcgcaacatcttgttggcaagaactgcaaaggataaaaatgtctcttcatta
tgggatagaatatctgaagaggaattgatttctcttggagatttgattaacaaagttgat
gagaagaatctagttgattggtgcgggcgtactaagcttattggttgcatatgtgatttt
gtgttgcttaaacctgaaattggtcagtccatgattgagaagttgcttggtatgcttcga
gattctgattaccgagttcggttctgcctggcacaacgaattggcatattattccaaact
tgggacggtcacaatgaactcttccaagatatatgttccaattttggtccaaggttggtg
attttctcaaaagatagagttgttacagcaaaggaagttttggctgctggtcctcaggct
ggatccctgttggaaaccacgataataaccctcatgcatcttgcagtggagagtgagaaa
atagagttagaggctgtttttatgatgtctgttgttgctgcaattgatccttctcaaagg
gaattggtcactgctgtgcttgataatttatcgagagaattaaattatactagcagggca
aagtatatggaggagctgatcgggccacttcttttttggtgggttgcttgtggtgtaagt
ttagtggcacttgtggagataagggacctgtttgtctcgagtgtggaaccttgtaatttc
atcctgtactgttgccaatggcttcttccagctctgctcctgaatgaggacttctccaat
ttgaattgggttgctaagattgcctgtcagcccctagcaactttggtcaagattcacttt
gtgcatgtgttttcagtttgtatggcactgcattgtagtaaaaagactggatggaaaaag
ggatcagctgtgctggaaagtttgattttgaggattgctgagatatctgagaatgagaga
gacaagctcatcaaaaggcacatggtttctattgtcaaccatcttttttctcttgctgct
gcttctgcagaccctgcacctcctctcttttccagagatacgattgtgcatgccattgaa
actgttgttgatggattcttggagatggaggatcgttctagaagtgctggcctggttgac
aaaattaatattttccgacctgatagagtattttcttttatagttgagatgcattacaaa
gttactgcagcagctcatcaaaggcacaaatgtcatagattaggtggcattgaggtgcta
gttaatgtacttggccacagagctggtgtttcaagtagtttcatttaccttctcaacctt
gttggccaatgtattggtcgggatgctttgcttaaccaatgttgtcgtattatttcaacg
ctgcttaagatttacaaagattgtccatcagatgagactacacgcgtgctcggtgaacaa
cttcagtttttgatatctaaattggttttgtgttattcgccatatgacaatgatggtgaa
aatcccgttgcttgttcatctgatgttctgccgctgctccgtgagcttattttgcattct
gatgcatcgctttatgagtacatcaaggagcttgagcccttgcctgacttggatatgttt
tctgacatacgaaagttccatgaggaattatgtctagactactcagcaaagaatcactta
gtaaatctggcaaaaaggtctctctaccttccaccaagagtacttgtttggagccttcaa
gcgttgcacaaaagattctttgaagaggaagcttgtcaagggtggaagagagcaaaactt
ggttttttgaatgaatattggcactctgaccaagatattgtttctgcaatttggcatctt
gttcgaatgtgtagcttggatgatactgacaactttgccacattggtttctgattttgtg
tctagggttggtattgatgatccccatcgcgttgttctccatctccctggggagattagc
catgcacctcgctttgaagaagataaagctgaaaagggaacagatcggcttgttcaactg
gatacagttgtatctgacaaacttttgaattcacttataaggcttttgaagaagtatttg
atggatgactctgttaagataattgatatgacatctcaagctttgcgggggatactttca
acagagaaaggtcaaagagctttgctattatttgatcaacatgagaaatctcttattgag
gttcactccaagggtgtcaacacggagctcgtacagaaactggtatcagatctggaagca
aagttcaatgctgaagcaatttctctggagaactctgctatgtggaagactcgtgacaaa
acttttgatatgtgggtttgtccgctggtttatggactgattggttactgtgatgatatt
atcataaggttatgtcaagatatatgtttggtaaaatctgaagttgcagagcttttgttc
ccaagtgtcatggttaatctagcatggagaaaagatttggatgttgacctatgcaagttg
atatctttccaggttcgggaaaacatattcattgagtccaatacgctgatgaaatcaata
aaagttatgttggatgcacttaatcagcttcggctgtgtcatatgctggagagatccaca
tcattgcctgggtcatgtaagcgagaaaactcaaagcacactaaggcttctagttatgga
tcaaaatcccattctacatcagggaagccgaaggacaattcgtcatctagattggtaaca
tcaacattatcgtgggaaaaggtttactggcttcctattgattatcttgtggttgcaaag
tctgccattaattgtggttcttactttactgctgttctctatgtggaacactggtgtgag
caccactttgatagcctcacactagggagcccagatttctcccatcttgaaatactgcca
agccacattgaaatacttgtctcagcagtcacgcaaatcaatgagcctgatagcctctat
gggataattcaatctcacaagttgacctctcaaataaccatgttcgaacatgaaggaaat
tggactaaagcccttgagcactatgatttactagtacaatcgggactgaaggagccaata
agtggccatccaaaaagtctttcttctgacgagtctcaaccagtggttccagcactgctt
tctaaatcaaaagatcagattatgcaaaagagaccttttaaaggtttgattagatctttg
cagcaaattggctgcacccatgtgctggacgtatattgccagggattagcttctctgaaa
ggccaacttcaacacgatttagaattcactgaactgcagtatgaagctgcttggcgtgct
ggtaattgggatttttctctacttaatggtgtagctactccggttcttgatcaaaaaatt
aaatgtggtcattttaatgagaatttgcacagctgtttaagggctttagaggaaggggaa
tttgatgagtttcacacaaaattgagagattccaagaaggagcttctgctgtccatctgt
catgcaagtaaggagagcactgaatacatatactcagccatggttaaacttcagatcttt
tatcatgttggaatggcttggggtttacgttggagtatgttatgcaaaaaaacagttgct
tcgtctgtgacattgaggttgtcatctgaacctattgaccccttcatggaccagctgtca
tggctgaataaagattggaggcgaatattggaacaagcgcagttgcacatgaatttgcta
gaaccattcatagcattcaggagggtcttatttgagatcttaaattgtagagacttcaaa
ttgcaacatcttctggaagcagcatctacacttcggaaaggcattcagttttctcaggct
gctgcatctttgcacgaatttaagtccctttgcacagctatggggaaagaacattccaat
gtttattggcatggaaggcagcttgaagaagctaagcttctgcgggcccaaggtcagcat
gagatggcaataaaccttgctaagtatatagcccaagattcccaatttgatgattatacc
tcagatgtatttcgcttagttgggaaatggcttgccgaaactcgttcaagcaattctagg
actgtattggataaatacctgaaacatgcagtatcactggcagacaatctcaaggctaca
gacagaaagtctatagcaaaacaatgccaaatgcatttccatctttctcattatgctgat
gcactctatcgtactaatgaagagagactgaactccaatgagtggcaagcagcaatgcgc
ttaaggaaattcaaggcaaaggagctgaaagctctaattaaacgtcttaaaagttcatca
aagggagaacaaactgagtattcattaaaaatacaagagctgcagaagcaacttgcaatg
gatggggaagaggaagaaaagttgcaggaagacagggacaacttcttaactactgcttta
gaagggtataaacgctgtttggtcattggggatgaatatgatgtcagagtggtgtttcga
cttgtttccttgtggtttggtctttcacccaggccaattgttatcaatggcatgattagc
acaatcaaggaggttcagtctcacaagttcataccattggcataccaaattgcttcaaga
atgggtagcacaaaagatcagggaccacatagttttcagtttgctttggtttctcttgtg
aagaaaatggccattgaacatccttatcataccatattccagctccttgctctggcaaat
ggtgatcggattaaagagaagcagcgtagtagaaattcatttgtggcggatatggacaaa
aaggttgctgcagaaaatctcttgatagaactgcattcatatcatggggatgtcatcaga
caaatgaaacaaatggtggagatttatatcaaacttgcagaaatggaaacaaagagagag
gacacaaacagaaaggttacactacctagagatattcgtagtgttcgagaactcgaactt
gttcctgtcataacatctaattttcctgttgaccggagttgccaatattgtgaaggatct
tttcctcacttcaaaggctttacagattctgtcactgtgatgaatggtataaatgcgcca
aaagcggttgaatgcttgggttctgatggtaaaatgtatcgacaacttgcaaaatcaggc
aatgatgacctgcggcaggatgctgtaatggaacagtttttcagtttggttaacactttc
ttacagaaccaccgggagacgtggaagagaagattgagaatacacacatataaggtagtt
ccttttaccccatgtgcgggcgttattgaatgggtgactggcactgtacctctaggtgat
tatcttaccggaagcacgagaaatggaggagcccatggacgctatggacaaggagattgg
acattcctcaaatgtaggcatcacatggcaacggaaagtgacaagcgcagggctttccaa
gaagtttgtgagaacttcaggccggtcatgcattacttcttcctagaaagatttctacat
ccagctaattggtttgaaaagaggcttgcttatacaagaagtgtggctactagttcaatg
gttggttacattgttgggcttggagatcgacattccatgaacatacttattgatcaagca
actgcagaagtagttcatatagatcttggtgtagcatttgagcaaggcctgatgctgaaa
acacctgagagggtgccattccggttgactagggatatcatagatggtatgggcgtaaca
ggtgtggaaggggtttttaggaggtgctgtgaggaaactctctctgtcatgcgagcaaac
aaagaagcattattgactattgttgaggtttttatccatgatcctctgtataagtgggcc
ttatcccctttgaaggctttgcagcgtcaaaaggaaactgattatgatttggagacaagc
ttggaaggctcagaagaagatgaatatgaggggaacaaagatgctgctagagctttgctg
cgtgttaaacaaaaacttgatggatatgaagaaggtgaaatgagaagtgtgcgtggacag
gttcaacaactcgtacaagatgcaattgatcctgatcgtttgagtcaaatgtttccgggc
tggggggcttggatgtga

DBGET integrated database retrieval system