KEGG   Coffea arabica (coffee): 140005875
Entry
140005875         CDS       T11342                                 
Name
(RefSeq) ESCRT-related protein CHMP1B
  KO
K12197  charged multivesicular body protein 1
Organism
carb  Coffea arabica (coffee)
Pathway
carb03272  Virion - Hepatitis viruses
carb04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    140005875
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    140005875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:carb04131]
    140005875
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:carb04147]
    140005875
Membrane trafficking [BR:carb04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    140005875
Exosome [BR:carb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140005875
  Exosomal proteins of other body fluids (saliva and urine)
   140005875
  Exosomal proteins of colorectal cancer cells
   140005875
SSDB
Motif
Pfam: Snf7 Ist1
Other DBs
NCBI-GeneID: 140005875
NCBI-ProteinID: XP_071903118
UniProt: A0ABM4U755
LinkDB
Position
4e:complement(1847571..1848728)
AA seq 203 aa
MGNTEKLMNQIMELKFTAKSLQRQARKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIR
KRSEQMNYLRLASRLDAVVARLDTQAKMTTINKSMGNIVKSLESSLNTGNLQKMSETMDQ
FERQFVNMEVQAEFMENSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAIP
TKTTEKVDEDDLSRRLAELKARG
NT seq 612 nt   +upstreamnt  +downstreamnt
atggggaacaccgagaaattgatgaatcaaatcatggagctcaaattcacggcgaagagc
cttcagcgccaggcgagaaagtgcgaaaaagacgagaaatctgagaaattgaaggttaag
aaagccatcgagaaaggaaacatggacggcgcgagaatctacgctgagaacgctatccgc
aagcgcagcgagcagatgaattacctccgtctggcctctcggcttgacgccgtggtcgct
cgcctcgatacccaggccaagatgaccacgatcaataaatctatggggaatattgtcaaa
tctctcgagtcgagtcttaataccgggaatctccagaagatgtcggagaccatggaccaa
ttcgagaggcagtttgtgaatatggaagtccaggcagagtttatggagaattctatggcc
ggaagtacgtcgttgtcgacgcccgaaggtgaagtcaacagcttgatgcaacaggtggcg
gatgattatggacttgaggtctccgttgggctgccgcagccagctgcgcacgccataccg
acgaagactaccgagaaggtcgatgaggacgatctctccaggcgtctcgccgagctcaag
gctcgtgggtga

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