Coffea arabica (coffee): 140007786
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Entry
140007786 CDS
T11342
Name
(RefSeq) ATP-dependent DNA helicase pfh1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
140007786
03029 Mitochondrial biogenesis [BR:
carb03029
]
140007786
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
140007786
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
140007786
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
140007786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
DEAD
AAA_16
Herpes_Helicase
SLFN-g3_helicase
UvrD-helicase
PhoH
NB-ARC
ATPase_2
NACHT
nSTAND3
NPHP3_N
ResIII
AAA_11
ATPase
AAA_5
AAA_7
ATP-synt_ab
RsgA_GTPase
T2SSE
NTPase_1
cobW
Zeta_toxin
Viral_helicase1
nSTAND_NTPase5
MobB
TrwB_AAD_bind
TsaE
ABC_tran
AAA
Motif
Other DBs
NCBI-GeneID:
140007786
NCBI-ProteinID:
XP_071907203
UniProt:
A0ABM4UIU8
LinkDB
All DBs
Position
5c:complement(44331732..44334452)
Genome browser
AA seq
520 aa
AA seq
DB search
MKQLFSSALATLRYYSSATYHSTKWSKNRYNYKSKWGGLSSPIKPKTRWTNEQSQVLNKS
KMNSPKMPRKPRMKWTDEQTQVLNAILEGKSVFVSGSAGTGKTALLEHVIKKLKKIHGRS
QVFVTASTGVAACALNGMTLHSFAGTGLGGVDRASLLSRVLSDRRAYRRWIKAKVLVMDE
SSMIEADFFNDLEFIASEIRGQDPLLKGKVWGGIQLVVSGDFFQLPPVLKKKKKKGAKVF
AFEADCWNASFDLQIELTKVFRQSEADLVKLLQGIRRGDSDPEDLQILKQRCFSSEEDPS
AVQLFPRNEDVNRVNKKHLQSLGEQIFVYSAVDSGEEPSKKQLRSGIAPDQLELCKGARV
MLCKNINPWLKLVNGATGTIIDFHDKIDAFYESAGDCIDSDIHSICSDGYLLPVVKFDSG
QVLKIGLETWVVMDGERVVAKRKQIPLILAWALSIHKCQGMTLDRLHTDLRRAFGCGMVY
VALSRVKTLDGLHLSGFNPSKIEADPKVLQFYQNLSSSRY
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttgttctcctctgctttagcaacattgaggtattattcgagtgccacttac
catagcacaaaatggagcaaaaatagatataactacaagagcaaatggggtggtctttct
tcccctataaagccgaagacgaggtggactaatgagcaatctcaagtcttaaacaagagc
aaaatgaattctcctaaaatgcctagaaagcctagaatgaagtggactgatgagcaaaca
caagtcttgaatgccattctggagggaaagtctgtatttgtcagtggatcagcagggacc
ggtaaaactgctttgcttgagcatgttataaagaaactcaagaaaattcatggtcgatcc
caggtttttgtgacagcttccacaggagttgctgcttgtgcccttaatggtatgaccctt
cactcatttgcaggcactggtctcggtggtgttgatcgtgcaagtttgctatctagggtt
ctttcagataggagggcatatcggaggtggatcaaggccaaagtgctagtcatggatgaa
agtagcatgattgaggctgacttcttcaatgatcttgagttcatagccagtgagatacgg
ggtcaggatcctttgttgaagggaaaggtttggggtggaatacagctagttgtgagtggt
gactttttccaattacctcctgttctcaaaaagaagaagaagaagggtgccaaagtattt
gcatttgaagctgactgctggaatgcaagttttgatttgcaaattgagctcacaaaggtt
ttccggcaatcagaggctgatcttgtgaaattactgcagggaatacgtagaggagatagt
gaccctgaggaccttcagatattaaaacaacgatgcttctcatcagaggaggatccttca
gctgtacagctgttcccgaggaatgaagatgtgaatagggtgaacaagaagcacctgcaa
agcttaggcgagcaaatttttgtttattctgctgttgacagtggtgaagagccatcaaag
aagcagcttagatcaggaattgcacctgatcagcttgagctctgcaaaggtgcgagggtg
atgctctgcaaaaatataaacccttggcttaaacttgtgaatggggctactggtactatc
atagattttcatgacaaaattgatgctttttatgaaagtgctggggactgtattgatagt
gatattcactccatatgcagtgatggttacttactacctgtagtaaaatttgactctgga
caagtacttaagattggtttagaaacatgggttgtaatggatggagaaagggttgttgct
aagcgaaagcagatacccctcatactggcttgggcactaagcattcacaaatgtcaggga
atgactcttgaccgccttcacacagacctccgtcgggcttttggctgtggaatggtctat
gttgcgctttcacgggtgaaaaccttggatggacttcatttatctggttttaatccttct
aagatcgaggcagacccaaaggttctgcaattctatcagaatctttcaagttcacgatat
tag
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integrated database retrieval system
