Coffea arabica (coffee): 140007817
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Entry
140007817 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K28527
splicing factor YJU2
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140007817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
140007817
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140007817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Saf4_Yju2
SSRP1_C
DUF8118
Motif
Other DBs
NCBI-GeneID:
140007817
NCBI-ProteinID:
XP_071907289
UniProt:
A0ABM4UJ29
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Position
5c:complement(45310881..45314939)
Genome browser
AA seq
333 aa
AA seq
DB search
MGERKVLNKYYPPDFDPAKIPRRRQPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
EDVIGENYLGIQIFRFYFKCTRCSAEITYKTDPKNSDYVVESGATRNFEPWRAEDEQVES
EKRKRDSEEMGDAMKSLENRTLDSKREMDILAALDEVKSMKSRQASVSVDAMLEVLQRAN
EEKERKLFEEDEALIRSIFKGSSESYVRRINDDDFDDEEDVASTVPASEEASNSVSKRKK
LDEERLGNPTDTLSDGSALDKDKAGVSGSSNNGKSIFKSPLVRVSILKKPAADSNGSKAN
EGEETNQKADHNQTVRSTGLQSLCQLYQSDEDD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacggaaggttctgaacaagtactatccgccggatttcgatccggcgaagatt
ccacggcggaggcaaccgaagaaccagcagatgaaagttcggatgatgcttcctatgagt
attcgctgtaatacgtgcggcaactatatttacaaaggcacaaagttcaattcaagaaag
gaagacgttatcggagagaactacttgggaattcaaatattcagattctatttcaagtgc
acaaggtgctcagctgagattacgtacaaaacagatccaaagaattctgattatgttgtc
gaatctggcgcaacacggaattttgagccctggcgtgcagaggatgagcaagttgagagt
gagaagaggaaaagagattctgaagaaatgggggatgctatgaaatcattggagaataga
acgttggactcaaaacgagaaatggatatacttgctgcattggatgaagtgaagtccatg
aagtcaagacaagcaagtgtcagcgtagatgcaatgctggaagttctgcaacgtgcaaat
gaggagaaagaaaggaagctgtttgaagaggatgaagctctcataagatctatatttaag
ggatcaagtgaaagctatgtgcgaaggattaatgatgatgactttgatgacgaggaggat
gtagcttccacagttcctgccagtgaagaagcatcaaattctgtttcaaagaggaaaaaa
ctggatgaagaacgactgggcaacccaacagatacattgtcagatggcagtgcacttgat
aaagataaagctggtgtttctgggtcttcaaataatggaaaatccattttcaagtcgcca
ttagtgagagtatctattctgaagaagccagctgcagattcaaatggcagcaaagcaaac
gaaggggaagagaccaaccaaaaggcagatcacaatcagactgttagaagcactggcttg
caatcattgtgccaactgtatcagagtgatgaagatgattaa
DBGET
integrated database retrieval system
