Coffea arabica (coffee): 140008300
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Entry
140008300 CDS
T11342
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
carb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140008300
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140008300
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
140008300
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
140008300
03036 Chromosome and associated proteins [BR:
carb03036
]
140008300
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
140008300
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
140008300
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
140008300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140008300
NCBI-ProteinID:
XP_071908307
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Position
6c:4368706..4372696
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AA seq
491 aa
AA seq
DB search
MFNKIIRRGHRKVSKSDGADYGYAPPGGGRSSGSVSTSNVVVNHASRGGALSNSGQLTTT
MPAAAPLPPSGTIESLPLFRDVPVTERQNLFLKKLQICCFQFDFSDTLKMVREKEIKRQT
LAELVDYVQSGSGKITESNQEEMVRMISLNIFRCLPPASHENTGSENVDPEEEEPYLDPA
WQHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIY
GKFMVHRPFIRKAINNIFYRFIYETERHSGIAELLEILGSIINGFALPMKEEHKLFLVRA
LIPLHKPKPIALYHQQLSYCIVQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLGELEE
VLEATQAAEFQRCMVPLFRQVARCLNSSHFQVAERALFLWNNEHIVSLIAQNRNVILPII
FEALEKNIQSHWNQAVHGLTVNVRKMFLEMDVELFEECQRQYAEKEARAKELEEQRQLTW
QRLAAAAAQGG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaaattataagaagagggcaccgtaaggtgtccaaatcagatggcgcggat
tacggttacgcaccccctggtggtggaaggagttccggctccgtttccacttccaatgtg
gtggttaaccacgcctctcgtggtggagctctttccaattccggacagcttacgacaaca
atgcctgctgcagcgcctttgcccccttccgggaccatcgagagcctgcctttgttccgg
gatgtgccagtcactgagcgtcagaatttgttcttgaagaaactgcagatttgttgcttc
caatttgacttttctgatacgttgaagatggttagggagaaggaaatcaagaggcaaact
ctggcggagctggtggattacgtacaatcagggtcggggaaaattacggagagtaaccag
gaggaaatggtgaggatgatttcattgaatatattccggtgcttacctcctgcttcgcat
gaaaatacagggtctgagaatgtagaccctgaagaggaggagccgtatctcgatcccgcg
tggcagcatttgcagctagtatacgaattgctgttgcgatacgtggtttcatctgatacg
gatactaaggtagccaagaggtacattgatcattcatttgtgttgaagctactggatttg
tttgattctgaggatccaagagagagggagtatttgaaaaccattcttcataggatatat
gggaagttcatggtgcacaggccatttattaggaaggctataaataatatcttctatcgg
tttatatacgagacagagaggcacagtgggattgcggaactgctggagattctcggaagc
ataattaatgggtttgcattacctatgaaggaggagcataagttgtttcttgtacgggca
cttataccactccacaagccaaagccgattgctttatatcatcagcagttatcatactgc
atcgttcagtttgttgaaaaggattacaagctggcggatacagtcataaggggtttgttg
aaatactggccagtcactaattgccagaaggaagttctctttctaggggaactcgaagaa
gtgctagaggcaacacaagctgctgaatttcaacgttgcatggtccctcttttcagacag
gtagctcgttgcctcaacagttctcattttcaggttgccgaacgagctctcttcttgtgg
aataatgagcacattgtgagcttaatagcccagaatcggaatgtgatattaccaattata
tttgaagctttggaaaagaacatacagtctcactggaatcaggcagtgcatgggttgact
gtaaatgtcagaaaaatgtttttggagatggatgtcgagttatttgaggagtgccaaagg
cagtatgcagagaaagaagccagagccaaagagttagaagagcagcgacaattgacatgg
caaagattggctgctgctgcagcacaagggggctga
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