Coffea arabica (coffee): 140008420
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Entry
140008420 CDS
T11342
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic-like isoform X1
KO
K02357
elongation factor Ts
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
140008420
03029 Mitochondrial biogenesis [BR:
carb03029
]
140008420
Translation factors [BR:
carb03012
]
Eukaryotic type
Elongation factors
140008420
Prokaryotic type
140008420
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
140008420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
DUF2859
Motif
Other DBs
NCBI-GeneID:
140008420
NCBI-ProteinID:
XP_071908792
UniProt:
A0ABM4UNC5
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All DBs
Position
6c:complement(9220658..9227686)
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AA seq
1213 aa
AA seq
DB search
MTPVLPSSPSNNLVNPADALINRKDTFLTRCSFLQKSRKQGLLSQRYTLPMSTSFRLFPQ
FRIGCALQPKLRGHIGLATQTDVALEETDLPGADKDTGEVSESPLDAIETNEDSSAKSDG
SSTTARSKRTRPVRKSDMPPIRTEDLIPGATYTGKVRSIQPFGAFVDFGAFTDGLVHVSR
LSDGFVKDVGDVVSVGQEVTVRLVEANTETGRISLTMRESDDPSKPQKQRDTPAGTSRAP
RKSNQRRDEVKRSSKFVKGQELDGTVKNLVRAGAFISLPEGEEGFLPTSEEADEGFGNFT
GGSSLQVGQEVKVRVLNINRGKVQLTMKKEETAGEFDLVQGVVHTATNPFVLAFHRNKDI
ATFLDEQDTTVKPTEPSQDTVLNTDAIADSAEATGKSEDQESLHESEGSFEILSLEGSTS
AAIDTVDEAQTLGKYEDQENIIADSLREVDSAVQNVGDESEASSDVLAAAGSTSTVDPVT
DVLPATEKVEDGEKSELSGIVSGQISSSENLIGQEAQEDESKKKDVTVKDEIQTETPIGN
EEFISAAKDAEEIVAPNLEIDGGIASSESLIGEEGTEDEVKDVTVKDQLQIQTEAPVEKQ
KVISASKNEGEIVAPNPEINTGVASSGEKEGLIGEEGPEDEVKDVAVKDEVQTEAPIEKE
EIISASKNEEEIVAPNPEINGGISSSGTPEEESAVNEVTENIIVSVADAVQAESPLSETE
PLSGTTVITEQVGPDSTKKGNVADLSEQSSTPSQKEATTKAAISPALVKQLREETGAGMM
DCKRALSETGGDMVKAQEYLRKKGLASADKKASRTTAEGRIGSYIHDSRIGVLIEVNCET
DFVSRGDIFKELVEDLAMQVAACPQVQYLAADDVPKEIVDKEREIEMQKEDLLSKPEQIR
LKIVDGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLE
KKSQDFATEVAAQTAAKPTEPKKEQPIAVEAKETVDKPVKATISPALVKQLREETGAGMM
DCKKALSEMGGDLEKAQEYLRKKGLSSAEKKYSRLAAEGRIGSYIHDSRIGVLIEVNCET
DFVGRGEIFKELVDDLAMQVVASPQVQCVSVEDIPATIVNKEKELEMQREDLQSKPENIR
EKIVEGRVSKRLGELALLEQPFIKNDSMLVKDLVKQTVASLGENIKVRRFVRFTLGEESE
PELGEEAAAAVKE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgtgcttccaagttcacctagcaataatttagttaatccagcagatgcctta
ataaacaggaaggacacgtttcttaccagatgcagtttcttacagaaatcaaggaaacaa
ggtttgctttcacaaagatatacgttacctatgtccacatctttcaggttatttccacag
tttaggattggatgtgctttacaacctaaattgaggggccatataggattggcaacccag
actgatgtagcattagaagagactgatttgcctggagctgataaagatactggtgaagtc
tcagaaagtccattagatgctattgaaacaaatgaagattcctctgccaaatcagatgga
agctccactactgctcgatctaaacgaacaagacctgttaggaagagtgacatgcctcct
atcaggactgaggatttgattcctggtgcaacttataccggaaaagtaagatcaattcag
ccatttggcgcttttgttgattttggtgccttcacggatggccttgtgcatgtttctaga
ttgagtgatggttttgtgaaggatgttggtgatgtcgtctctgttggacaagaggtgaca
gtaagattagttgaagcaaacacagaaacaggaagaatctctcttacaatgagggaaagt
gatgatcctagcaaaccccagaagcagagagacacccctgctggtacctccagagctccc
agaaagtccaaccaaaggcgggatgaggtgaagagaagctcaaagtttgttaaagggcaa
gaacttgatggcactgttaaaaatttagtcagagccggtgccttcatatctctaccggaa
ggggaggaaggtttcctgcccacatcagaggaagctgatgaaggttttgggaactttacg
ggaggatcttcactccaagttggacaagaagtgaaagttcgtgtgttaaacatcaataga
ggaaaggtacaattgacgatgaaaaaagaggaaactgctggagagtttgacttagtgcag
ggtgttgtccatactgcaaccaacccctttgtattggctttccatagaaacaaagatata
gcaacatttttggatgagcaagacacaacagtgaaaccaaccgaaccatcacaggatact
gtactcaatacagatgccattgcagacagtgctgaagccacaggaaaaagtgaggatcaa
gaaagcttacatgaatcagaaggaagctttgagatactgtcccttgagggtagcacatct
gctgcaattgatacagtagatgaagctcaaactttgggcaagtatgaggatcaagaaaat
ataattgctgattctttgagagaggttgatagtgcagtacaaaatgttggtgatgaatct
gaagcaagctctgatgtattggctgctgcaggtagcacatccaccgtagatccagtaact
gatgtacttcctgccacagagaaagtagaagatggtgaaaaatctgagctatcaggaatt
gtatctggtcaaatttcatcatcagagaatttgattggtcaggaggctcaagaggatgaa
tctaaaaagaaagatgtgacggtcaaagatgaaatacaaactgagacacctattggaaat
gaagaattcatttctgctgcaaaagatgcagaagaaatagtggcacctaacctggagata
gatggtggtattgcaagctcagagagtttgattggtgaggaaggtacagaggatgaagtc
aaagatgtgactgtgaaagatcaattacaaatacaaactgaggcacctgttgaaaagcag
aaggtcatttctgcttcaaaaaatgaaggagaaatagtggcacctaacccagagataaat
actggtgttgcaagctcaggtgaaaaagagggtttgattggtgaggagggtccagaggat
gaagtcaaagatgtggctgtgaaagacgaagtacaaactgaggcacctattgaaaaggaa
gaaatcatttctgcttcaaaaaatgaagaagaaatagtggcacctaacccagagataaat
ggtggtatttctagctcagggactcctgaagaagaaagtgcggtcaatgaagtcactgag
aatatcattgtgagtgtagctgatgcagtgcaggcggagagtcctctttcagaaactgaa
cctttgtctggtacaactgttataacagaacaggtagggcctgattcaaccaaaaaggga
aatgttgcagacttaagtgagcaaagtagtacgccttcacaaaaagaagcaaccaccaaa
gctgctatatcacctgctcttgtgaagcagttgcgtgaagaaactggagcaggtatgatg
gattgcaagagagcactttcagaaacgggaggagacatggttaaagctcaggaatacctc
agaaagaaagggttagcaagtgcagataagaaagccagccggactactgctgaaggaaga
atcgggtcatacatccatgatagtaggattggcgtcttgatagaggtgaactgtgagact
gactttgtgtcgaggggtgacatcttcaaggaattagttgaagacttggccatgcaagtg
gctgcatgccctcaagtacagtatcttgctgcagatgatgttcccaaggagatagttgat
aaggaaagagaaattgaaatgcagaaagaagatctactttcaaaacctgagcagatcagg
ttaaagattgttgatgggcggatcaggaaaaggctcgaggagctggccttattggagcag
ccctacattaagaatgataaaatggtggttaaagattgggtgaagcagactatagcaaca
attggtgaaaatataaaggtcaaaagatttgtacgctacaacctgggagaaggtttggaa
aagaaaagccaagattttgccacagaggtagctgcccagactgcagcaaaaccaactgaa
ccaaagaaagagcagcctatcgccgttgaagccaaggaaacagttgacaagcctgtaaaa
gcaacgatctcaccagcactggttaaacaattgcgagaagaaactggagcaggtatgatg
gactgcaagaaagccctctctgaaatgggtggagaccttgagaaggcacaagagtatctg
aggaagaagggtctgtcttctgctgaaaagaagtatagcaggcttgcagcagaaggtagg
attgggtcctatattcatgattctcgcattggggttctcatcgaagtcaactgtgaaact
gacttcgtgggtagaggagaaatttttaaggaattagttgatgacctagcaatgcaagtt
gtggcaagtccacaggtgcagtgtgtatctgttgaagatattccagcaaccattgtcaat
aaggaaaaagagttggagatgcagagagaagaccttcagtccaaacctgagaatataaga
gagaaaatcgtcgagggaagggtatcaaagaggcttggtgagcttgcccttctagagcag
cctttcataaaaaatgacagtatgttggtcaaggacttggtaaagcaaactgtggcatct
cttggcgagaacataaaagtaagacggttcgttcgatttactcttggcgaggaaagtgaa
ccagaattgggtgaagaggcagctgctgcagtaaaagagtga
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